Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30627
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   1.6  
AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochr...    22   6.3  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +3

Query: 372 CEECNKIIGIDSKDLSYKDKHWHEACFLCAKC 467
           CE CN+  G      +++  H  E  F C +C
Sbjct: 137 CEVCNRSFGYKHVLQNHERTHTGEKPFECQEC 168



 Score = 23.4 bits (48), Expect = 2.1
 Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 1/128 (0%)
 Frame = +3

Query: 267 FCCWQCDESLTGQRYVLRDEHPYCIKCYESVFANGCEECNKIIGIDSKDLSYKDKHWHEA 446
           F C  C+ S  G ++VL++         E  F   C+EC+K    D    ++   H  E 
Sbjct: 135 FTCEVCNRSF-GYKHVLQNHER--THTGEKPFE--CQECHKRFTRDHHLKTHMRLHTGER 189

Query: 447 CFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGCGEVFRAGTKKMEYKTRQWHE 626
            + C  C     D+QF    +       +  +    C+ C   F    +   +     +E
Sbjct: 190 PYRCEHC-----DRQFVQVANLRRHLRVHTGERPYGCEHCSMKFSDSNQLKAHVLIHTNE 244

Query: 627 KCF-CLRC 647
           K F C +C
Sbjct: 245 KPFECDKC 252


>AF265299-1|AAG17642.1|   63|Tribolium castaneum putative
          cytochrome P450 monooxigenase protein.
          Length = 63

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 4  FGSRSRPVLSYTSLLKKK 57
          FG   +P++SY+ L + K
Sbjct: 30 FGKEKKPIVSYSDLQEMK 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,774
Number of Sequences: 336
Number of extensions: 2844
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)