Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30627
         (774 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   1.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.8  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   2.4  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   2.4  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   2.4  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   9.6  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   9.6  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = +3

Query: 246 KDWHSGHFCCWQCDESLTGQRYVLRD--EHPYCIKC 347
           K + +G  CCW C       +Y +RD  +   CI C
Sbjct: 597 KKYVAGEQCCWHC---FNCTQYQIRDHKDVTQCISC 629


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 261 GHFCCWQCDESLTGQRYVLRDEHPYCIKC 347
           G  CCW CD+      YV  DE+  C+ C
Sbjct: 463 GDTCCWVCDQ-CEEYEYV-HDEYT-CMDC 488


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 261 GHFCCWQCDESLTGQRYVLRDEHPYCIKC 347
           G  CCW CD+      YV  DE+  C+ C
Sbjct: 553 GDTCCWVCDQ-CEEYEYVY-DEYT-CMDC 578


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 333 YCIKCYESVFANGCEECNKIIGIDSKDLSY 422
           Y +     + ANG  E  KI+ +  KD+ Y
Sbjct: 10  YILSVAVIIRANGINEILKIMAVSMKDIRY 39


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -2

Query: 446 GLVPVLVLVRQILRVNADDLVALFAAVGEDAFIALDAVGVFI 321
           GL+  L L R+ILR++A D  ++  AVG    +    + VFI
Sbjct: 213 GLIGCLTLGRRILRLDAIDEASI--AVGASGNVFAGYLLVFI 252


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 390 IIGIDSKDLSYKDKHWH 440
           +IGI S+D ++ DK+ H
Sbjct: 125 VIGISSRDSAFSDKNIH 141


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/17 (52%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
 Frame = +1

Query: 721 DKFATRCVKCN-KKNHT 768
           D  +T C KCN K+ HT
Sbjct: 66  DALSTGCNKCNEKQKHT 82


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/17 (52%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
 Frame = +1

Query: 721 DKFATRCVKCN-KKNHT 768
           D  +T C KCN K+ HT
Sbjct: 66  DALSTGCNKCNEKQKHT 82


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,701
Number of Sequences: 438
Number of extensions: 3015
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)