Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30625
         (787 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L46721-1|AAC41774.1|  164|Homo sapiens mucin protein.                  35   0.38 
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.              33   1.2  
AJ292079-1|CAC44892.1|   67|Homo sapiens MUC5AC protein protein.       32   2.7  
Z34281-1|CAA84035.1|   62|Homo sapiens mucin protein.                  30   8.2  

>L46721-1|AAC41774.1|  164|Homo sapiens mucin protein.
          Length = 164

 Score = 34.7 bits (76), Expect = 0.38
 Identities = 20/55 (36%), Positives = 25/55 (45%)
 Frame = +2

Query: 527 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 691
           P  TT+ T   T  +   P  S T AP T    +  ++ TLAPT S T   T  T
Sbjct: 41  PVPTTSTTSAPTTSTTSAPTTSTTSAPTTSTPSAPTTSTTLAPTTSTTSAPTTST 95


>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
          Length = 1349

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +2

Query: 524  LPKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLTKN 697
            +P +T + T   T  +   P  S T AP  + +    ++ TLAPT S T   T  T +
Sbjct: 1090 IPASTPSTTSAPTTSTTSAPTTSTTSAPTHRTTSGPTTSTTLAPTTSTTSAPTTSTNS 1147



 Score = 32.3 bits (70), Expect = 2.0
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +2

Query: 536 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLT 691
           T+T + P+T  ++  P  S T  P+T  + S  ++ T APT S T   T  T
Sbjct: 773 TSTTSTPQTS-TISSPTTSTTPTPQTSTTSSPTTSTTSAPTTSTTSAPTTST 823



 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +2

Query: 536 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS 664
           TT+ T   T  +   P  S T  P+T  S +  S+ T APT S
Sbjct: 669 TTSTTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAPTTS 711



 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +2

Query: 536 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS 664
           TT+ T   T  +   P  S T  P+T  S +  S+ T APT S
Sbjct: 804 TTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTAS 846


>AJ292079-1|CAC44892.1|   67|Homo sapiens MUC5AC protein protein.
          Length = 67

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 536 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 670
           TT+ T   T  +   P  S T  P+T  S +  S+ T APT S T
Sbjct: 16  TTSTTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAPTTSTT 60


>Z34281-1|CAA84035.1|   62|Homo sapiens mucin protein.
          Length = 62

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +2

Query: 536 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS 664
           TT+ T   T  +   P  S T  P+T  S +  S+ T APT S
Sbjct: 12  TTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTAS 54


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.137    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,212,453
Number of Sequences: 237096
Number of extensions: 1808216
Number of successful extensions: 9653
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9648
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)