Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30625
         (787 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g35794.1 68418.m04297 hypothetical protein contains Pfam prof...    30   2.0  
At3g29710.1 68416.m03745 hypothetical protein contains Pfam prof...    29   4.6  
At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51) ide...    28   6.1  
At5g34970.1 68418.m04127 hypothetical protein similar to At5g368...    28   8.1  
At1g21980.1 68414.m02750 1-phosphatidylinositol-4-phosphate 5-ki...    28   8.1  

>At5g35794.1 68418.m04297 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 662

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +2

Query: 581 PARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLTKNGFVADGAHIP 727
           PA++   A  T A+ +  +  T APT +PT  + +L  + F     HIP
Sbjct: 42  PAQTTATAMATNAAPTTAAPTTTAPTTAPTTESPMLDDSTFYDALKHIP 90


>At3g29710.1 68416.m03745 hypothetical protein contains Pfam profile
           PF03384: Drosophila protein of unknown function, DUF287
          Length = 669

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +2

Query: 575 KKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTLLTKNGFVADGAHIP 727
           + P ++   A  T A+ +  +  T APT +PT  + +L  + F     HIP
Sbjct: 71  QSPTQTTATAMATNAAPTTAAPTTTAPTTAPTTESPMLDDSTFYDALKHIP 121


>At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51)
           identical to obtusifoliol 14-demethylase (GI:14624983)
           [Arabidopsis thaliana]
          Length = 488

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +1

Query: 52  ALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN 222
           ++ A  GK        + +T   F  +      DP  YDP R + GR     +GA++
Sbjct: 366 SVTARDGKTYDIPKGHIVATSPAFANRLPHIFKDPDTYDPERFSPGREEDKAAGAFS 422


>At5g34970.1 68418.m04127 hypothetical protein similar to At5g36850,
           At1g27780, At2g05560, At3g42730, At1g52020, At2g14770,
           At3g43390, At3g24390, At1g34740, At1g25886, At4g03300,
           At4g05280
          Length = 478

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +2

Query: 554 PRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPTE*TTL 685
           PR +   +K  R   ++P+ K S ++ +    +P+V+PTE  T+
Sbjct: 11  PRKQHGQRKEKRVLRVSPRRKRSATKATEELGSPSVAPTEDLTV 54


>At1g21980.1 68414.m02750 1-phosphatidylinositol-4-phosphate
           5-kinase, putative / PIP kinase, putative /
           PtdIns(4)P-5-kinase, putative / diphosphoinositide
           kinase, putative strong similarity to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 752

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 622 KVKGFYEYVGPDGVTYRVDYTADEK 696
           +++GF  + G DG TYR  + AD K
Sbjct: 135 RMEGFGTFTGADGDTYRGTWVADRK 159


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.317    0.137    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,770,903
Number of Sequences: 28952
Number of extensions: 251338
Number of successful extensions: 825
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1765546400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)