Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30623
         (355 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0925 - 12440917-12441560,12441675-12441810                       31   0.26 
01_01_0017 + 133311-133615,133698-133824,133912-134253                 29   1.1  
06_01_0900 + 6926600-6927202                                           28   1.8  
05_01_0188 - 1357074-1357098,1357811-1357941,1358572-1358667,135...    28   2.4  
01_06_1408 - 37088014-37088448,37088892-37089167,37090777-37092297     26   7.4  
05_01_0356 + 2785410-2785670,2785843-2785960,2786800-2786891,278...    26   9.8  

>03_02_0925 - 12440917-12441560,12441675-12441810
          Length = 259

 Score = 31.1 bits (67), Expect = 0.26
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = -3

Query: 248 NVFTKGYFVTLLIFIYIIYYRGVCIESASECVGCTCAREHRRDTPPTSAPHTRTCT 81
           N++++GY  +       ++ RG+   S   C    CA +HRR   P  A  T T T
Sbjct: 53  NLYSQGYGTSTAALSTALFNRGL---SCGSCYELRCAGDHRRSCLPGGATVTVTAT 105


>01_01_0017 + 133311-133615,133698-133824,133912-134253
          Length = 257

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 170 SASECVGCTCAREHRRDTPPTSAPHTRT 87
           S+S      C +   R+ PP  APHT T
Sbjct: 6   SSSTASAAACCKSRSRNPPPAPAPHTST 33


>06_01_0900 + 6926600-6927202
          Length = 200

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 101 VRRWGACLGGARARTCIRRTRSHSRYILHG 190
           VR W   + G R +T IRR R   R+  HG
Sbjct: 76  VREWSELVAGPRWKTFIRRFRRSPRHHHHG 105


>05_01_0188 -
           1357074-1357098,1357811-1357941,1358572-1358667,
           1358736-1358769,1358867-1358958,1359273-1359332,
           1359376-1359435,1360016-1360525,1360645-1360719,
           1360809-1361015
          Length = 429

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 177 TYSTVINNINKYQQRYKIAFRKNIRSLKCIYFCLAYKKKRIAYLVFYSFSLIINS 341
           T  TV++  N Y   +      N+     I F   +K KR+AYL  Y  + +IN+
Sbjct: 35  TTKTVLDPWNPYFPLWPPEIPPNLGLNGAICFIEDWKMKRMAYLASYRSTCVINA 89


>01_06_1408 - 37088014-37088448,37088892-37089167,37090777-37092297
          Length = 743

 Score = 26.2 bits (55), Expect = 7.4
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -3

Query: 221 TLLIFIYIIYYRGVCIESASECVGCTCAREHRRDTPPTSAPHTRTCTPR 75
           TLL+ ++ + +      SAS+ VGC+C    RR    T+      C+PR
Sbjct: 683 TLLLRVFSVSHAAAA--SASQVVGCSCQVRLRR-RALTTRRRELPCSPR 728


>05_01_0356 +
           2785410-2785670,2785843-2785960,2786800-2786891,
           2787114-2787176,2787299-2787397,2787726-2787884,
           2788420-2788491,2788567-2788699,2788813-2788877,
           2789016-2789091,2789236-2789337,2789524-2789716,
           2790576-2790654,2792939-2793007,2793261-2793311,
           2793680-2793742,2793926-2794041,2794263-2794347,
           2794898-2794957,2795594-2795639,2796011-2796084,
           2796350-2796400,2796474-2796674,2796747-2796791,
           2797063-2797156,2797226-2797371,2797510-2797739,
           2798136-2798196,2798290-2798347,2799020-2799513
          Length = 1151

 Score = 25.8 bits (54), Expect = 9.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 318 CKILNMQFFFFCKPNK 271
           C+I   +FFFFC P++
Sbjct: 316 CRIAARKFFFFCDPHR 331


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,406,953
Number of Sequences: 37544
Number of extensions: 147981
Number of successful extensions: 432
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)