Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30617
         (675 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0699 - 5757410-5757458,5757760-5757831,5758084-5758152,575...    31   0.64 
05_04_0240 + 19325981-19326260,19327135-19327156,19327361-193274...    30   1.9  

>11_01_0699 -
           5757410-5757458,5757760-5757831,5758084-5758152,
           5758329-5758477,5758568-5758699,5758784-5759109,
           5759330-5759399,5759684-5759738,5760322-5760377,
           5760500-5760700,5761466-5761651,5761756-5761906,
           5761978-5762206,5762321-5762582,5762858-5762959
          Length = 702

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = -2

Query: 353 GNEIASQFTKKKTIGTDNKKFENHAQT---I*HYSIGTLVRQCFD 228
           G EIA +     T+G D+K+FEN  Q    + H +I  LV  C++
Sbjct: 40  GKEIAVKMLHNDTLGFDDKQFENEFQNLMRLEHPNIVRLVAYCYE 84


>05_04_0240 +
           19325981-19326260,19327135-19327156,19327361-19327484,
           19327721-19327811,19327984-19328073,19328450-19328550,
           19328702-19328866
          Length = 290

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -1

Query: 675 PPLLIHQFIHVS*INNK-KHFIITF 604
           PPL++HQF H    NN+  HF+ TF
Sbjct: 220 PPLVVHQFEHALDQNNRVDHFVKTF 244


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,395,982
Number of Sequences: 37544
Number of extensions: 275045
Number of successful extensions: 525
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)