Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30617
(675 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127397-1|BAC86958.1| 130|Homo sapiens protein ( Homo sapiens ... 32 2.1
BC095501-1|AAH95501.1| 349|Homo sapiens CCRL1 protein protein. 31 2.8
BC069438-1|AAH69438.1| 350|Homo sapiens chemokine (C-C motif) r... 31 2.8
AY221094-1|AAO65972.1| 350|Homo sapiens chemokine receptor-like... 31 2.8
AF233281-1|AAF44751.1| 350|Homo sapiens CC chemokine receptor p... 31 2.8
AF193507-1|AAF61299.1| 350|Homo sapiens chemokine receptor prot... 31 2.8
AF110640-1|AAF59827.1| 350|Homo sapiens orphan seven-transmembr... 31 2.8
X99897-1|CAA68172.1| 2262|Homo sapiens calcium channel alpha1 su... 30 6.5
U79668-1|AAB49678.1| 916|Homo sapiens alpha1A-voltage-dependent... 30 6.5
U79667-1|AAB49677.1| 1182|Homo sapiens alpha1A-voltage-dependent... 30 6.5
U79666-1|AAB64179.1| 2505|Homo sapiens alpha1A-voltage-dependent... 30 6.5
U79665-1|AAB49676.1| 1194|Homo sapiens alpha1A-voltage-sensitive... 30 6.5
U79664-1|AAB49675.1| 949|Homo sapiens alpha1A-voltage-dependent... 30 6.5
U79663-1|AAB49674.1| 949|Homo sapiens alpha1A-voltage-dependent... 30 6.5
AF100774-1|AAC77460.1| 980|Homo sapiens voltage-dependent P/Q t... 30 6.5
AF004884-1|AAB61613.1| 2510|Homo sapiens neuronal calcium channe... 30 6.5
AF004883-1|AAB61612.1| 2266|Homo sapiens neuronal calcium channe... 30 6.5
AB035727-1|BAA94766.2| 2506|Homo sapiens alpha1A-voltage-depende... 30 6.5
AB035726-1|BAA94765.1| 2472|Homo sapiens alpha1A-voltage-depende... 30 6.5
>AK127397-1|BAC86958.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45488 fis, clone BRTHA2003759. ).
Length = 130
Score = 31.9 bits (69), Expect = 2.1
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -3
Query: 460 YIYFIMYDFIYLCPDIFI*INLYVTLTLQCYI 365
YIYF ++ +IYL I+I I LY+ L + YI
Sbjct: 36 YIYFYIFTYIYLYIFIYIYICLYIYLYIYLYI 67
>BC095501-1|AAH95501.1| 349|Homo sapiens CCRL1 protein protein.
Length = 349
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 265 CYIVC--AWFSNFLLSVP-IVFFFVNWLAISFPIF 360
C+I+C W + LLS+P +VF+ VN A PIF
Sbjct: 153 CWIICFCVWMAAILLSIPQLVFYTVNDNARCIPIF 187
>BC069438-1|AAH69438.1| 350|Homo sapiens chemokine (C-C motif)
receptor-like 1 protein.
Length = 350
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 265 CYIVC--AWFSNFLLSVP-IVFFFVNWLAISFPIF 360
C+I+C W + LLS+P +VF+ VN A PIF
Sbjct: 154 CWIICFCVWMAAILLSIPQLVFYTVNDNARCIPIF 188
>AY221094-1|AAO65972.1| 350|Homo sapiens chemokine receptor-like 1
protein.
Length = 350
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 265 CYIVC--AWFSNFLLSVP-IVFFFVNWLAISFPIF 360
C+I+C W + LLS+P +VF+ VN A PIF
Sbjct: 154 CWIICFCVWMAAILLSIPQLVFYTVNDNARCIPIF 188
>AF233281-1|AAF44751.1| 350|Homo sapiens CC chemokine receptor
protein.
Length = 350
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 265 CYIVC--AWFSNFLLSVP-IVFFFVNWLAISFPIF 360
C+I+C W + LLS+P +VF+ VN A PIF
Sbjct: 154 CWIICFCVWMAAILLSIPQLVFYTVNDNARCIPIF 188
>AF193507-1|AAF61299.1| 350|Homo sapiens chemokine receptor
protein.
Length = 350
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 265 CYIVC--AWFSNFLLSVP-IVFFFVNWLAISFPIF 360
C+I+C W + LLS+P +VF+ VN A PIF
Sbjct: 154 CWIICFCVWMAAILLSIPQLVFYTVNDNARCIPIF 188
>AF110640-1|AAF59827.1| 350|Homo sapiens orphan seven-transmembrane
receptor protein.
Length = 350
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 265 CYIVC--AWFSNFLLSVP-IVFFFVNWLAISFPIF 360
C+I+C W + LLS+P +VF+ VN A PIF
Sbjct: 154 CWIICFCVWMAAILLSIPQLVFYTVNDNARCIPIF 188
>X99897-1|CAA68172.1| 2262|Homo sapiens calcium channel alpha1 subunit
protein.
Length = 2262
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 475 ETNNEYIYFIMYDFIYLCPDIFI*INLYVTLTL 377
E NE+ YF FI+LC F+ +NL+V + +
Sbjct: 1782 ECGNEFAYFYFVSFIFLCS--FLMLNLFVAVIM 1812
>U79668-1|AAB49678.1| 916|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 916
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 475 ETNNEYIYFIMYDFIYLCPDIFI*INLYVTLTL 377
E NE+ YF FI+LC F+ +NL+V + +
Sbjct: 469 ECGNEFAYFYFVSFIFLCS--FLMLNLFVAVIM 499
>U79667-1|AAB49677.1| 1182|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 1182
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 475 ETNNEYIYFIMYDFIYLCPDIFI*INLYVTLTL 377
E NE+ YF FI+LC F+ +NL+V + +
Sbjct: 469 ECGNEFAYFYFVSFIFLCS--FLMLNLFVAVIM 499
>U79666-1|AAB64179.1| 2505|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2505
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 475 ETNNEYIYFIMYDFIYLCPDIFI*INLYVTLTL 377
E NE+ YF FI+LC F+ +NL+V + +
Sbjct: 1781 ECGNEFAYFYFVSFIFLCS--FLMLNLFVAVIM 1811
>U79665-1|AAB49676.1| 1194|Homo sapiens alpha1A-voltage-sensitive
calcium channel protein.
Length = 1194
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 475 ETNNEYIYFIMYDFIYLCPDIFI*INLYVTLTL 377
E NE+ YF FI+LC F+ +NL+V + +
Sbjct: 469 ECGNEFAYFYFVSFIFLCS--FLMLNLFVAVIM 499
>U79664-1|AAB49675.1| 949|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 949
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 475 ETNNEYIYFIMYDFIYLCPDIFI*INLYVTLTL 377
E NE+ YF FI+LC F+ +NL+V + +
Sbjct: 469 ECGNEFAYFYFVSFIFLCS--FLMLNLFVAVIM 499
>U79663-1|AAB49674.1| 949|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 949
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 475 ETNNEYIYFIMYDFIYLCPDIFI*INLYVTLTL 377
E NE+ YF FI+LC F+ +NL+V + +
Sbjct: 469 ECGNEFAYFYFVSFIFLCS--FLMLNLFVAVIM 499
>AF100774-1|AAC77460.1| 980|Homo sapiens voltage-dependent P/Q type
calcium channel alpha 1A subunit protein.
Length = 980
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 475 ETNNEYIYFIMYDFIYLCPDIFI*INLYVTLTL 377
E NE+ YF FI+LC F+ +NL+V + +
Sbjct: 267 ECGNEFAYFYFVSFIFLCS--FLMLNLFVAVIM 297
>AF004884-1|AAB61613.1| 2510|Homo sapiens neuronal calcium channel
alpha 1A subunit isoform A-1 protein.
Length = 2510
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 475 ETNNEYIYFIMYDFIYLCPDIFI*INLYVTLTL 377
E NE+ YF FI+LC F+ +NL+V + +
Sbjct: 1786 ECGNEFAYFYFVSFIFLCS--FLMLNLFVAVIM 1816
>AF004883-1|AAB61612.1| 2266|Homo sapiens neuronal calcium channel
alpha 1A subunit isoform 1A-2 protein.
Length = 2266
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 475 ETNNEYIYFIMYDFIYLCPDIFI*INLYVTLTL 377
E NE+ YF FI+LC F+ +NL+V + +
Sbjct: 1786 ECGNEFAYFYFVSFIFLCS--FLMLNLFVAVIM 1816
>AB035727-1|BAA94766.2| 2506|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2506
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 475 ETNNEYIYFIMYDFIYLCPDIFI*INLYVTLTL 377
E NE+ YF FI+LC F+ +NL+V + +
Sbjct: 1780 ECGNEFAYFYFVSFIFLCS--FLMLNLFVAVIM 1810
>AB035726-1|BAA94765.1| 2472|Homo sapiens alpha1A-voltage-dependent
calcium channel protein.
Length = 2472
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 475 ETNNEYIYFIMYDFIYLCPDIFI*INLYVTLTL 377
E NE+ YF FI+LC F+ +NL+V + +
Sbjct: 1781 ECGNEFAYFYFVSFIFLCS--FLMLNLFVAVIM 1811
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,993,203
Number of Sequences: 237096
Number of extensions: 1611112
Number of successful extensions: 6440
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6427
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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