Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30617
         (675 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106575-16|AAC78161.2|  334|Caenorhabditis elegans Serpentine r...    30   1.7  
AF078788-3|AAC26966.1|  547|Caenorhabditis elegans Hypothetical ...    29   2.3  
Z29121-1|CAA82387.3|  324|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z83102-1|CAB05462.2|  356|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z22180-5|CAA80174.2|  717|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AL110501-4|CAB54510.1|  368|Caenorhabditis elegans Hypothetical ...    28   7.0  
AF025452-5|AAK71872.1|  336|Caenorhabditis elegans Serpentine re...    27   9.2  

>AF106575-16|AAC78161.2|  334|Caenorhabditis elegans Serpentine
           receptor, class h protein3 protein.
          Length = 334

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +3

Query: 225 IIETLSNKCTYRVVLYSLCMVFELFVVCANCFFFCKLACNFVSHIFYI 368
           I   L N+  Y++ +      F+ ++ C NCFF      NF S IFY+
Sbjct: 154 IYPDLKNQRDYKIQMEKRFGTFKPYMWCDNCFFM-----NFSSKIFYV 196


>AF078788-3|AAC26966.1|  547|Caenorhabditis elegans Hypothetical
           protein ZC190.6 protein.
          Length = 547

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = -2

Query: 605 FYIYQLLMLSIFCE*LVLLFDTSK*VINVIHTYTTLADLQIFI*NKQ*VYIFYYV*FHLF 426
           F IYQ   L   C  L++LF  S  ++++ H  T       F+  KQ  Y  Y+V     
Sbjct: 27  FIIYQASSLHFNCRNLLILFSVSIYLLDISHGLTVFE----FLFEKQTYYHIYFVSVRGI 82

Query: 425 MSRHIY-LDKSLRNLNITMLYIKNM 354
             R ++    SL++L++ +  I+ +
Sbjct: 83  TWRFLHEFGYSLQSLSLFLFSIERL 107


>Z29121-1|CAA82387.3|  324|Caenorhabditis elegans Hypothetical
           protein ZK757.1 protein.
          Length = 324

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +3

Query: 195 NTLFLNTKYKIIETLSNKCTYRVVLYSLCMVFELFVVCANCFFFCK--LACNFVSHIFYI 368
           N + LNT      T  ++ T+   ++  C+VF LF +C   FF C+  L   F   IF++
Sbjct: 4   NNISLNTITTTPLTYRDRITFEFSVHGTCVVFNLF-LC--IFFICRPHLLRTFKPTIFFV 60


>Z83102-1|CAB05462.2|  356|Caenorhabditis elegans Hypothetical
           protein C54C8.1 protein.
          Length = 356

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -2

Query: 407 LDKSLRNLNITMLYIKNMGNEIASQFTKKKTIGTDNKKFEN 285
           L K  +NLN   LYI N  NE  +Q   +  + ++  + EN
Sbjct: 87  LVKERKNLNNIPLYILNRRNETGNQGVVRAFVSSNQNRLEN 127


>Z22180-5|CAA80174.2|  717|Caenorhabditis elegans Hypothetical
           protein K11H3.4 protein.
          Length = 717

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 267 LYSLCMVFELFVVCANCFFFCKLACNFVSHIFYI*H 374
           L+++C  +EL   C  C    K A NF+SH+  I H
Sbjct: 624 LHNICNQWELPDNCRFCKCALKFAPNFLSHVLSIPH 659


>AL110501-4|CAB54510.1|  368|Caenorhabditis elegans Hypothetical
           protein Y79H2A.6 protein.
          Length = 368

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -1

Query: 330 YKKKNNWHRQQKVRKPCTDYITLLD 256
           Y+K+N+W   ++++KP    +T LD
Sbjct: 131 YEKENDWWVSKQIKKPIRSTVTCLD 155


>AF025452-5|AAK71872.1|  336|Caenorhabditis elegans Serpentine
           receptor, class i protein29 protein.
          Length = 336

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +3

Query: 165 VNTICILIKDNTLFLNTKYKIIETLSNKCTYRVVLYSLCMVFELFVVCA 311
           V TIC L K   +    + K +   S+  TY +++Y LCM + L +  A
Sbjct: 111 VLTICFLRKYKAIM---QLKTLSNPSSSLTY-IIIYHLCMSYSLAITLA 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,670,717
Number of Sequences: 27780
Number of extensions: 302337
Number of successful extensions: 844
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)