Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30617
         (675 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    24   1.2  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    24   1.2  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      24   1.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   2.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   2.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   2.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   4.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   4.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   4.7  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    22   6.1  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   8.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.1  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    21   8.1  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    21   8.1  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 395 EIYLDKYVWT*IDEIIHN 448
           E+Y DKY +  IDEI+ N
Sbjct: 21  ELYSDKYDYVNIDEILAN 38


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 395 EIYLDKYVWT*IDEIIHN 448
           E+Y DKY +  IDEI+ N
Sbjct: 21  ELYSDKYDYVNIDEILAN 38


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 330 KLACNFVSHIFYI*HCNVKVT 392
           KLA  ++  +F + HCN++ T
Sbjct: 295 KLATRYIDFLFQVLHCNMENT 315


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 180 ILIKDNTLFLNTKYKIIETLSNK 248
           + +KDN L  N  Y +IE +  K
Sbjct: 92  LAVKDNKLASNAGYNVIEQVRTK 114


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 180 ILIKDNTLFLNTKYKIIETLSNK 248
           + +KDN L  N  Y +IE +  K
Sbjct: 92  LAVKDNKLASNAGYNVIEQVRTK 114


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 180 ILIKDNTLFLNTKYKIIETLSNK 248
           + +KDN L  N  Y +IE +  K
Sbjct: 92  LAVKDNKLASNAGYNVIEQVRTK 114


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 195 NTLFLNTKYKIIETLSNKCTYRVVLYS 275
           +T  LNTK   +E   +KC+   V YS
Sbjct: 347 STETLNTKCNTLERTPSKCSQTSVHYS 373


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 466 NEYIYFIMYDF 434
           NE  YFI+YDF
Sbjct: 381 NEGTYFILYDF 391


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 466 NEYIYFIMYDF 434
           NE  YFI+YDF
Sbjct: 381 NEGTYFILYDF 391


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -1

Query: 342 CKPVYKKKNNWHRQQKVRKPCTDYITLLDRYTC 244
           C+P   KK        V   C +Y  + D YTC
Sbjct: 543 CEPGMIKKQQGDTCCWVCDQCEEYEYVYDEYTC 575


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 222 KIIETLSNKCTY 257
           KII +LSN C Y
Sbjct: 302 KIISSLSNSCNY 313


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 180 ILIKDNTLFLNTKYKIIETL 239
           +L K+  L ++TK KIIE L
Sbjct: 36  LLKKEYPLVMDTKLKIIEIL 55


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -1

Query: 342 CKPVYKKKNNWHRQQKVRKPCTDYITLLDRYTC 244
           C+P   KK        V   C +Y  + D YTC
Sbjct: 453 CEPGMIKKQQGDTCCWVCDQCEEYEYVHDEYTC 485


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = -2

Query: 416 HIYLDKSLRNLNITMLYIKNMGNEIASQFTKKKTIGTDNK 297
           HI + K L ++ +++L   N+ +E+A++   + TIG  +K
Sbjct: 136 HI-ISKQL-HIPVSVLMGANLASEVANEMFCETTIGCKDK 173


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 180 ILIKDNTLFLNTKYKIIETL 239
           +L K+  L ++TK KIIE L
Sbjct: 4   LLKKEYPLVMDTKLKIIEIL 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,970
Number of Sequences: 438
Number of extensions: 4267
Number of successful extensions: 23
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)