Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30612
(749 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ... 73 2e-13
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ... 71 6e-13
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ... 70 2e-12
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin... 66 2e-11
At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85 hy... 40 0.002
At1g13050.1 68414.m01513 expressed protein 32 0.35
At2g19410.1 68415.m02264 protein kinase family protein contains ... 30 1.4
At2g18230.1 68415.m02124 inorganic pyrophosphatase [soluble] (PP... 29 3.3
At1g79060.1 68414.m09218 expressed protein 29 4.4
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 28 5.8
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 28 5.8
At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protei... 28 7.6
At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protei... 28 7.6
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 28 7.6
>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 73.3 bits (172), Expect = 2e-13
Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Frame = +2
Query: 203 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 382
C + +QI E S Y AM AYF D + G AK F +++ EEREHA KL++Y
Sbjct: 97 CEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNK 156
Query: 383 RG---KLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDY 553
RG KL V L + + +E AL LE V + + + S ND
Sbjct: 157 RGGRVKLQSIVMPLSEFE---HVDKGDALYGMELALSLEKLVNEKLLN-LHSVASKNNDV 212
Query: 554 HLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDKKLL 697
HL D++ EFL EQ + + ++ + L+++ H G + F++ LL
Sbjct: 213 HLADFIESEFLTEQVEAIKLISEYVAQLRRVGKGH---GTWHFNQMLL 257
>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 71.3 bits (167), Expect = 6e-13
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
Frame = +2
Query: 203 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 382
C + +QI E S Y A+ AYF D V G AK F +++ EEREHA L++Y
Sbjct: 95 CEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNK 154
Query: 383 RG---KLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDY 553
RG KL V + P A+E AL LE V + + + S +D
Sbjct: 155 RGGRVKLQPMVLPQSEFDHPEK---GDALYAMELALSLEKLVNEKLLN-LHSVASKNDDV 210
Query: 554 HLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDKKLLG 700
L D++ FL+EQ + + ++ S L+++ H G + FD++LLG
Sbjct: 211 QLADFIESVFLNEQVEAIKKISEYVSQLRRLGKGH---GTWHFDQELLG 256
>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
subunit cowpea2 precursor GI:2970654 (Vigna
unguiculata); contains Pfam profile PF00210:
Ferritin-like domain
Length = 253
Score = 69.7 bits (163), Expect = 2e-12
Identities = 51/158 (32%), Positives = 76/158 (48%)
Frame = +2
Query: 224 QIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGS 403
QI E S Y A+ AYF D V GFAK F D++ EER HA ++Y RG
Sbjct: 96 QINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKL 155
Query: 404 VTDLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEF 583
+ L+ + A+E AL LE +TN +++ ND LVD++ EF
Sbjct: 156 QSILMPVSEFDHEEKGDALHAMELALSLEK-LTNEKLLKLQSVGVKNNDVQLVDFVESEF 214
Query: 584 LDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDKKLL 697
L EQ + + ++ + L+++ H G + FD+ LL
Sbjct: 215 LGEQVEAIKKISEYVAQLRRIGKGH---GVWHFDQMLL 249
>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
[Arabidopsis thaliana] GI:1246401, GI:8163920
Length = 255
Score = 66.1 bits (154), Expect = 2e-11
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Frame = +2
Query: 212 MMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG- 388
++ +QI E S Y +M AYF D V G AK F +++ EER HA K ++Y RG
Sbjct: 97 VINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGG 156
Query: 389 --KLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLV 562
KL V+ + + + A+E AL LE + V K S ND L
Sbjct: 157 RVKLHPIVSPISEFE---HAEKGDALYAMELALSLEKLTNEKLLNVHKVA-SENNDPQLA 212
Query: 563 DYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDKKLL 697
D++ EFL EQ + + ++ + L+ + H G + FD+ LL
Sbjct: 213 DFVESEFLGEQIEAIKKISDYITQLRMIGKGH---GVWHFDQMLL 254
>At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85
hypothetical protein F9F8.14 - Arabidopsis thaliana,
EMBL:AC009991
Length = 355
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +2
Query: 227 IQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDY 373
I E S Y A+ AY D V GF K F D++ EER +A K ++Y
Sbjct: 297 IDVEYNVSYVYHALDAYIERDNVGLKGFTKFFNDSSLEERGYAEKFMEY 345
>At1g13050.1 68414.m01513 expressed protein
Length = 317
Score = 32.3 bits (70), Expect = 0.35
Identities = 31/106 (29%), Positives = 42/106 (39%)
Frame = +1
Query: 379 HEGQADRLRNRPHHVQGPRQHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPP 558
H+G N PHH Q P+ H V R+ + R RHQ P + + E P
Sbjct: 21 HQGGPSSSWNSPHHHQIPQAHSVAPPRVKIKTRG-----RHQTEP--PETIHESPSSRPL 73
Query: 559 GRLLVRGIPRRTVQGPARPRRQGLDPQENDGQARRPRRVHLRQETP 696
+P R ARP + L P+E R P R + + TP
Sbjct: 74 PLRPEEPLPPRHNPNSARPLQ--LSPEEQ----RPPHRGYGSEPTP 113
>At2g19410.1 68415.m02264 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 801
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 425 RAPANTSWESGASALEHAL-KLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDE 592
R+P TS +S +E + +L++++ +++ + + CE F+ + V LS E+L+E
Sbjct: 297 RSPPETSRKSKKVEIEEEVERLKNELQSTVFKYKQACEELFSTQNKVKMLSTEYLNE 353
>At2g18230.1 68415.m02124 inorganic pyrophosphatase [soluble] (PPA)
/ pyrophosphate phospho-hydrolase / PPase nearly
identical to SP|P21216 Soluble inorganic pyrophosphatase
(EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase)
{Arabidopsis thaliana}
Length = 218
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -2
Query: 184 PLIPDGDGADVTLCSCGRS*GSNESEDSKENSPHLNFSYNHRFFDDIQKN 35
P+I G+ D + C D KE PH + RFF+D +KN
Sbjct: 133 PMIDQGEKDDKIIAVCADDPEFRHYRDIKELPPH-RLAEIRRFFEDYKKN 181
>At1g79060.1 68414.m09218 expressed protein
Length = 396
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 205 ASLLHGEPLIPDGDGADVTLCSCGRS*GSNESEDSKENSPHLN 77
ASLL PL+ D D V++ S S S+ S E+ P L+
Sbjct: 175 ASLLMSLPLLKDSDSESVSISSSRMSLSSSSSGHDHEDLPRLS 217
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 547 RLPPGRLLVRGIPRRTVQGPARPRRQGLDPQENDGQARRPRRVHLRQETP 696
R PP R +R R ++ P R R + P++ G A R R +P
Sbjct: 315 RSPPRRSPIRRRSRSPIRRPGRSRSSSISPRKGRGPAGRRGRSSSYSSSP 364
>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 414
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 547 RLPPGRLLVRGIPRRTVQGPARPRRQGLDPQENDGQARRPRRVHLRQETP 696
R PP R +R R ++ P R R + P++ G A R R +P
Sbjct: 322 RSPPRRSPIRRRSRSPIRRPGRSRSSSISPRKGRGPAGRRGRSSSYSSSP 371
>At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protein
similar to Nit protein 2 [Homo sapiens] GI:9367116;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 294
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 452 SGASALEHALKLESDVTNSIREVIKTCESSFN 547
S S H LKL S T+++R + + SSFN
Sbjct: 37 SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68
>At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protein
similar to Nit protein 2 [Homo sapiens] GI:9367116;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 369
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 452 SGASALEHALKLESDVTNSIREVIKTCESSFN 547
S S H LKL S T+++R + + SSFN
Sbjct: 37 SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +1
Query: 520 HQDLREQLQRLPPGRLLVRGIPRRTVQGPARPRRQGLDPQENDGQARRPRRVHLRQETPR 699
H L E + G + V ++T G R +RQ +D G+ RR + V + +TP
Sbjct: 938 HASLEESSKDELSGHVSVTS--KKTTGGGGR-KRQHIDDTATGGKRRRQQTVAVLPQTPG 994
Query: 700 IEHINI 717
H N+
Sbjct: 995 QRHYNL 1000
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,078,152
Number of Sequences: 28952
Number of extensions: 283586
Number of successful extensions: 836
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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