Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30610
         (766 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0477 + 24057677-24059099,24059556-24060448,24060456-240605...    30   2.3  
10_05_0042 + 8481227-8481764,8482291-8482418,8483349-8483933,848...    28   7.1  
08_01_0701 + 6200351-6200470,6200879-6201104,6201502-6201747,620...    28   7.1  

>11_06_0477 +
           24057677-24059099,24059556-24060448,24060456-24060578,
           24060995-24061036
          Length = 826

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
 Frame = -2

Query: 255 RHVTGTKYNSAPD------FIYVPVFLIIFVLSSNELIALWTAWPFIK 130
           R +    YN  P+      F+Y+ VF   + +S+ +L+ LWTA  F++
Sbjct: 412 RDILARSYNDLPNNYMKSCFLYIAVFPEDYSISTADLVELWTAECFVQ 459


>10_05_0042 +
           8481227-8481764,8482291-8482418,8483349-8483933,
           8484033-8484061,8485221-8485612,8486038-8486454,
           8486587-8486668,8487116-8487686
          Length = 913

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -2

Query: 216 FIYVPVFLIIFVLSSNELIALWTAWPFIKLISRTDH 109
           F+YV ++   F +  ++LI LW A  F++  +  DH
Sbjct: 596 FLYVGIYPEDFTIKKDDLIKLWVAEGFVR-TAHNDH 630


>08_01_0701 +
           6200351-6200470,6200879-6201104,6201502-6201747,
           6201818-6201868,6202231-6202491,6202587-6202639,
           6202705-6202819,6202985-6203239,6203773-6204827
          Length = 793

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 252 HVTGTKYNSAPDFIYVPVFLI 190
           HV    Y S PD IY PVF+I
Sbjct: 347 HVVDAFYRSIPDTIYWPVFII 367


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,226,725
Number of Sequences: 37544
Number of extensions: 285130
Number of successful extensions: 533
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)