Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30610
         (766 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82261-7|CAH60757.2|  300|Caenorhabditis elegans Hypothetical pr...    31   0.90 
AL110484-10|CAB54401.1|  237|Caenorhabditis elegans Hypothetical...    31   1.2  
U39999-4|AAQ81270.1|   81|Caenorhabditis elegans Insulin related...    29   3.6  
AJ276028-1|CAC81655.1|  816|Caenorhabditis elegans TRP homlogous...    28   8.4  
AF040654-5|AAN65302.2|  816|Caenorhabditis elegans Trp (transien...    28   8.4  
AF040654-4|AAN65303.2|  886|Caenorhabditis elegans Trp (transien...    28   8.4  

>Z82261-7|CAH60757.2|  300|Caenorhabditis elegans Hypothetical
           protein C35D6.10 protein.
          Length = 300

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -2

Query: 594 LNHASD*LETLYPCRKYMYLMVRLIFILVLDSLIIMTINNN 472
           +N   D  + LYP  K ++ MVR+ + LV+  +  + + NN
Sbjct: 45  INEEQDQKDILYPVVKRLFAMVRIFYYLVIPLIASVILTNN 85


>AL110484-10|CAB54401.1|  237|Caenorhabditis elegans Hypothetical
           protein Y38E10A.10 protein.
          Length = 237

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = -2

Query: 267 TLVTRHVTGTKYNSAPDFIYVPVFLIIFVLSSNELIALWTAWPFIKLISRTDHYK 103
           ++V  +V+    N    F   P F      + N +  LW A  FIK I+   HY+
Sbjct: 121 SIVETYVSVAGANRGSGFCVAPTFTSFLAPTCNRVNGLWCASRFIKDINEETHYE 175


>U39999-4|AAQ81270.1|   81|Caenorhabditis elegans Insulin related
           protein 14 protein.
          Length = 81

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/65 (26%), Positives = 33/65 (50%)
 Frame = -2

Query: 537 LMVRLIFILVLDSLIIMTINNNVNFKCPSKRASTACYIIIYG*TEESKLRRMTNA*QGLY 358
           ++  L F+L++   I   +++  + KC +K  S    + I+G TE+  +R +T      +
Sbjct: 1   MLTHLKFLLLVSLFINFAVSSE-DIKCDAKFISRITKLCIHGITEDKLVRLLTRCCTS-H 58

Query: 357 CSLTH 343
           CS  H
Sbjct: 59  CSKAH 63


>AJ276028-1|CAC81655.1|  816|Caenorhabditis elegans TRP homlogous
           cation channel proteinprotein.
          Length = 816

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -2

Query: 204 PVFLIIFVLSSNELIALWTAWPFIKLISRTDHYKFIYKLFL 82
           P+F ++++L+ +  +  +   PFIK +S +  Y F   L +
Sbjct: 346 PLFSLVYLLAPHSSMGQFAKKPFIKFLSHSGSYIFFLILLI 386


>AF040654-5|AAN65302.2|  816|Caenorhabditis elegans Trp (transient
           receptor potential)channel family protein 2, isoform a
           protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -2

Query: 204 PVFLIIFVLSSNELIALWTAWPFIKLISRTDHYKFIYKLFL 82
           P+F ++++L+ +  +  +   PFIK +S +  Y F   L +
Sbjct: 346 PLFSLVYLLAPHSSMGQFAKKPFIKFLSHSGSYIFFLILLI 386


>AF040654-4|AAN65303.2|  886|Caenorhabditis elegans Trp (transient
           receptor potential)channel family protein 2, isoform b
           protein.
          Length = 886

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -2

Query: 204 PVFLIIFVLSSNELIALWTAWPFIKLISRTDHYKFIYKLFL 82
           P+F ++++L+ +  +  +   PFIK +S +  Y F   L +
Sbjct: 346 PLFSLVYLLAPHSSMGQFAKKPFIKFLSHSGSYIFFLILLI 386


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,533,139
Number of Sequences: 27780
Number of extensions: 305964
Number of successful extensions: 643
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)