Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30609
(686 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 421 e-118
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 414 e-116
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 413 e-116
SB_56| Best HMM Match : Actin (HMM E-Value=0) 412 e-115
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 357 6e-99
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 219 1e-57
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 2e-47
SB_54| Best HMM Match : Actin (HMM E-Value=0) 177 5e-45
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 155 2e-38
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 149 2e-36
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 106 2e-23
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 3e-09
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 59 4e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 58 5e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 56 2e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 1.2
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 1.5
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 2.0
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 2.7
SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5) 29 3.5
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 29 3.5
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 4.7
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 6.2
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_56863| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 8.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 8.1
SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6) 28 8.1
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 8.1
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 8.1
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 421 bits (1037), Expect = e-118
Identities = 195/198 (98%), Positives = 198/198 (100%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 404
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 405 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 584
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 585 LAGRDLTDYLMKILTERG 638
LAGRDLTDYLMKILTERG
Sbjct: 181 LAGRDLTDYLMKILTERG 198
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 637 GYSFTTTAEREIVRDI 684
GYSFTTTAEREIVRDI
Sbjct: 198 GYSFTTTAEREIVRDI 213
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 414 bits (1019), Expect = e-116
Identities = 192/196 (97%), Positives = 196/196 (100%)
Frame = +3
Query: 51 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 230
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 231 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 410
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 411 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 590
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 591 GRDLTDYLMKILTERG 638
GRDLTDYLMKILTERG
Sbjct: 182 GRDLTDYLMKILTERG 197
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 637 GYSFTTTAEREIVRDI 684
GYSFTTTAEREIVRDI
Sbjct: 197 GYSFTTTAEREIVRDI 212
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 413 bits (1017), Expect = e-116
Identities = 191/198 (96%), Positives = 197/198 (99%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 404
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 405 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 584
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Query: 585 LAGRDLTDYLMKILTERG 638
LAGRDLTDYLMKILTERG
Sbjct: 181 LAGRDLTDYLMKILTERG 198
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 637 GYSFTTTAEREIVRDI 684
GYSFTTTAEREIVRDI
Sbjct: 198 GYSFTTTAEREIVRDI 213
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 412 bits (1015), Expect = e-115
Identities = 191/196 (97%), Positives = 196/196 (100%)
Frame = +3
Query: 51 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 230
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 231 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 410
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 411 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 590
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 591 GRDLTDYLMKILTERG 638
GRDLTDYLMKILTERG
Sbjct: 182 GRDLTDYLMKILTERG 197
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 637 GYSFTTTAEREIVRDI 684
GYSFTTTAEREIVRDI
Sbjct: 197 GYSFTTTAEREIVRDI 212
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 357 bits (877), Expect = 6e-99
Identities = 165/173 (95%), Positives = 170/173 (98%), Gaps = 2/173 (1%)
Frame = +3
Query: 45 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 404
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 405 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 557
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 637 GYSFTTTAEREIVRDI 684
GYSFTTTAEREIVRDI
Sbjct: 171 GYSFTTTAEREIVRDI 186
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 219 bits (536), Expect = 1e-57
Identities = 100/200 (50%), Positives = 139/200 (69%), Gaps = 3/200 (1%)
Frame = +3
Query: 63 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 236
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 237 ILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 413
+L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 414 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 593
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AG
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAG 186
Query: 594 RDLTDYLMKILTERGLLVHH 653
RD+T YL+K++ RG +H
Sbjct: 187 RDITKYLIKLMLLRGYAFNH 206
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 186 bits (452), Expect = 2e-47
Identities = 84/89 (94%), Positives = 86/89 (96%)
Frame = +3
Query: 51 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 230
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 231 RGILTLKYPIEHGIITNWDDMEKIWHHTF 317
RGILTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 159 bits (386), Expect = 2e-39
Identities = 75/83 (90%), Positives = 80/83 (96%)
Frame = +3
Query: 390 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 569
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 570 ILRLDLAGRDLTDYLMKILTERG 638
I+RLDLAGRDLTDYLMKILTERG
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERG 160
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 637 GYSFTTTAEREIVRDI 684
GYSFTTTAEREIVRDI
Sbjct: 160 GYSFTTTAEREIVRDI 175
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 177 bits (432), Expect = 5e-45
Identities = 80/114 (70%), Positives = 96/114 (84%)
Frame = +3
Query: 297 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 476
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 477 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 638
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERG
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERG 2242
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3
Query: 12 ASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 170
AS T+ F+ V +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2080 ASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +1
Query: 637 GYSFTTTAEREIVRDI 684
GYSF +TAE++I+RD+
Sbjct: 2242 GYSFQSTAEQQIIRDL 2257
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 155 bits (377), Expect = 2e-38
Identities = 66/102 (64%), Positives = 88/102 (86%)
Frame = +3
Query: 345 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 524
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 525 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGLLVH 650
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G H
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFH 227
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 149 bits (361), Expect = 2e-36
Identities = 69/76 (90%), Positives = 73/76 (96%)
Frame = +3
Query: 411 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 590
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 591 GRDLTDYLMKILTERG 638
GRDLTDYLMK++TERG
Sbjct: 61 GRDLTDYLMKLMTERG 76
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 637 GYSFTTTAEREIVRDI 684
GYSFTTTAEREIVRDI
Sbjct: 76 GYSFTTTAEREIVRDI 91
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 106 bits (254), Expect = 2e-23
Identities = 49/131 (37%), Positives = 82/131 (62%)
Frame = +3
Query: 255 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 434
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 614
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 615 MKILTERGLLV 647
++ E + V
Sbjct: 123 RQMFEETNVEV 133
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +3
Query: 69 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 170
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 8/70 (11%)
Frame = +3
Query: 450 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 605
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 606 DYLMKILTER 635
++ ++L ER
Sbjct: 100 FFVQQLLRER 109
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 58.4 bits (135), Expect = 5e-09
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 8/181 (4%)
Frame = +3
Query: 60 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 239
+A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 240 LTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 413
L Y P + G + NWD ++IW +TF E + M +I
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEI 324
Query: 414 MFETFNSPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 575
+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 325 LFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVR 384
Query: 576 R 578
R
Sbjct: 385 R 385
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = +3
Query: 6 IPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 185
IP + + ++ FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 683 IPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Query: 186 --MGQKD-SYVGDEAQSKRGILTL 248
+ KD GD A +K G++ L
Sbjct: 742 DNVNVKDYKKYGDAAVAKSGVMHL 765
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +3
Query: 456 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 635
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L ++
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +3
Query: 183 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 362
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 492 TGIVLDSGDGVSHTVPI 542
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -1
Query: 167 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 51
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 300 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 479
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 480 SGRTTGIV 503
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 76 STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 222
S P+ R TT+P P +PSWV + + W TW RP
Sbjct: 36 SPSKPSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 40 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 144
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 246 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 398
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 387 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 503
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 632 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVEHDTGG 489
L E + +V Q + GV S G+G G TISG D+GG
Sbjct: 1474 LQEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGG 1521
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 40 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 144
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1
Query: 407 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 228
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 227 AL 222
++
Sbjct: 214 SV 215
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -2
Query: 592 PAKSRRRMAWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNM 413
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 412 IWVIFSLLALGLR 374
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 31 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 144
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5)
Length = 257
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -1
Query: 623 DLHEVVGQVATSQVQTEDGVGQSVTFVDGYGV----GDTISGVEHDTGGTTGGVQ 471
D H++ + +TS V+ + G + D + T S E +T GTTGG Q
Sbjct: 149 DKHQITNKASTSSVEKANTAGTTGGTQDQHATQGNKASTCSFEEANTAGTTGGTQ 203
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 29.1 bits (62), Expect = 3.5
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -2
Query: 532 VWE--TPSPESSTIPVVRPE-------AYSESTAWMATYMAGELKVSNMIWVIFSLLALG 380
VWE T P + T+P + + Y S +W+ L N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 379 LRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMIPCSMGYFRVRIPLLLWAS 215
L A + T C T +L ++ ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -1
Query: 575 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 477
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +3
Query: 390 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 539
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 375 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 503
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 25 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 150
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 40 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 144
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_56863| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4248
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 575 PSGLGWSRLDRLPHEDPHREGVTR 646
PSGL W L RL H++ G TR
Sbjct: 1490 PSGLKWLELFRLEHKETKENGWTR 1513
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 172 PWWRGRPTMDGKTARGASSPAKPALHMPEP 83
P W + G T R PAKP+L++P P
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 40 SRCATTMLLR-L*STMAPACARPVSPAT 120
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6)
Length = 188
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -2
Query: 541 MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELK-VSNMIWVIFSLLALGLRGAS 365
M + + PSP P+A+ + A Y +G LK S V + L+ G G
Sbjct: 1 MAELADLPSPRMDWSSTDLPQAFKKFRATCELYFSGPLKEKSEPDKVSYLLIWTGDEGIE 60
Query: 364 VSSTGCSSGATRSSL*KVW 308
+SST S L W
Sbjct: 61 LSSTWALSADDSKKLDTYW 79
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 40 SRCATTMLLR-L*STMAPACARPVSPAT 120
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 40 SRCATTMLLR-L*STMAPACARPVSPAT 120
S C T+L+R L +T APA P SPAT
Sbjct: 14 SSCLATLLVRPLETTPAPAPTTPTSPAT 41
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,839,459
Number of Sequences: 59808
Number of extensions: 475891
Number of successful extensions: 1702
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1697
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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