Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30608
(677 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09) 38 0.006
SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3) 35 0.070
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.092
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 33 0.28
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 32 0.37
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 31 1.1
SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_11898| Best HMM Match : DMP1 (HMM E-Value=1.6) 30 1.5
SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 30 2.0
SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 29 2.6
SB_13201| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_41| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42) 29 3.5
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 29 4.6
SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 29 4.6
SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_2413| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_22747| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-06) 28 8.0
SB_53672| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 28 8.0
>SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09)
Length = 787
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 614
+ ++ L + EKK Q ML+ K A+K P F ++ +EN G A+ N +++LEEEK
Sbjct: 607 QRNKEALAKKEKKIQEMLEEEKKATKFEP-FNLE--TENRGSVKAEKWLNSVQQELEEEK 663
Query: 615 K 617
K
Sbjct: 664 K 664
>SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3)
Length = 1168
Score = 34.7 bits (76), Expect = 0.070
Identities = 17/61 (27%), Positives = 36/61 (59%)
Frame = +3
Query: 429 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 608
++EEK++RL+ E+ + ++ +A K+ASK+ + T + +S N ++ K ++E
Sbjct: 427 EVEEKKRRLQRYERLQSSLNEAYKEASKSSVDGT-RDESRNEEITQTSCNETSGKTPIKE 485
Query: 609 E 611
E
Sbjct: 486 E 486
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 34.3 bits (75), Expect = 0.092
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +3
Query: 432 IEEKRQRLEEAEKKRQAMLQAMKDA 506
+EE+R+RLE EK+RQA QAM++A
Sbjct: 319 LEEERKRLENLEKERQAAQQAMQEA 343
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 32.7 bits (71), Expect = 0.28
Identities = 23/81 (28%), Positives = 43/81 (53%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 614
EE+RQ+ EEA K+R+ L A K++SK+ +K E G + + ++ TK + E
Sbjct: 1344 EERRQKREEARKRREEKL-AKKESSKSSNK---RKSKERSGNPSFKRIKSTTKGRETEVT 1399
Query: 615 KISLSIRIKPLTIEGLSVRQT 677
K S + + +S++++
Sbjct: 1400 KDSPVVESSDKSCSDMSIKRS 1420
>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
Length = 703
Score = 32.3 bits (70), Expect = 0.37
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +3
Query: 432 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 608
+EE+R+R EEAEKKR+ + ++ + + KK E L QLER K +++ E
Sbjct: 252 MEEERKRKEEAEKKREEEERKRREEEEAAQKW---KKEEL--LRQQQLEREKEEQERAE 305
>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
Length = 924
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/63 (25%), Positives = 34/63 (53%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 614
EE+R++ EEAE++R+ + K + +QK+ + Q ++ K Q EE++
Sbjct: 636 EERRRQQEEAERQRREQEEVFKQQEQQRQQLELQKRQQ-----EQQRQQELQKRQQEEKQ 690
Query: 615 KIS 623
+++
Sbjct: 691 RMA 693
>SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 999
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 432 IEEKRQRLE----EAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQ 599
++EK++RL+ E E+K KDA K ++ +K E A+++ K ++Q
Sbjct: 811 LKEKQERLKAKKKEEEEKELEKRSKTKDAKKYFESWKSKKDEELKEAHRAKMQELKKQKQ 870
Query: 600 LEEEKK 617
EEE+K
Sbjct: 871 KEEEEK 876
>SB_11898| Best HMM Match : DMP1 (HMM E-Value=1.6)
Length = 1705
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 462 AEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLS 629
A KK + ++ +D ++TG QK+S+ + A E+ K QL E +K LS
Sbjct: 1428 AGKKCDSQVRYDEDLNETGRKKHKQKRSKIIDIDFANSEKEKVVTQLSESRKRKLS 1483
>SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 614
+EK + + E KKR M + ++ K +QK+ E L N LE + + E+E+
Sbjct: 119 KEKAEEVNERAKKRALMYKYHEEKLKEDKRLNLQKQQEE--LRNKILEDVQALQ--EDER 174
Query: 615 KISLSIRIKPLTIE 656
+L +R K +E
Sbjct: 175 NKTLQVRNKQREVE 188
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 614
++KR+R E+ K+RQ L+ K+ + I+K+ Q ER + KE+ E++K
Sbjct: 914 KDKREREEKERKRRQQQLE--KEKKEKEKKLLIEKEKRE---KEKQKERLREKEEKEKQK 968
Query: 615 K 617
+
Sbjct: 969 E 969
>SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 614
E++R++ EE E+ Q Q + ++ Q+K E+ L L+R K EEE+
Sbjct: 218 EKRRKKKEEQERLEQQRRQREQRIAEKRKRLEEQRKVESLHLLKELLKRVADKRAEEEEE 277
Query: 615 K 617
K
Sbjct: 278 K 278
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 614
EE+ ++ EEAE+K+Q L+ + + Q+K E + + + KE+ E++
Sbjct: 277 EEEEKQKEEAERKKQEKLEKLAKKKEELKERKRQEKLEQKAKKKEKERQEREKEKEREKE 336
Query: 615 KI 620
+I
Sbjct: 337 RI 338
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQ----LERNKTKEQL 602
E++RQR E+ ++ + +Q +KD + I ++ E Q L+R K +
Sbjct: 440 EDERQRAEDERQRVKHEMQRLKDERRRAEEDEIARQEEELRRLQEQREKELKRYKELQMA 499
Query: 603 EEEKK 617
EEEK+
Sbjct: 500 EEEKR 504
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGP--NFTIQKKSENFGLSNAQLERNKT-KEQLE 605
EEKR+ EEA++K + A + A +Q+K E L + E+ + +EQ E
Sbjct: 251 EEKRRAEEEAKRKAEEEKAAREKAEMEEKLRRLKLQEKEEKRKLEAEKKEKERVEREQRE 310
Query: 606 EEKK 617
E +K
Sbjct: 311 ERRK 314
>SB_13201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/73 (27%), Positives = 39/73 (53%)
Frame = +3
Query: 429 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 608
DI K++ EE +KKR+ + ++ + +KKS + +AQ+E + + QLE
Sbjct: 252 DIGIKQKNPEECQKKRRKRRNLVSPEAEVNAKRSQEKKSVSL---SAQIEPD-LRNQLER 307
Query: 609 EKKISLSIRIKPL 647
E++ L+ + + L
Sbjct: 308 ERRNDLNTKFQKL 320
>SB_41| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 663 RDPRWSAA*CGWTGRSSSPLPAAPWSCCAPAGHC 562
RD A CG TG+ S P +CCA A C
Sbjct: 181 RDAAIVAKGCGCTGQYSQTCTQGPGACCATAESC 214
>SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42)
Length = 1078
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNA-QLERNKTKEQLEEE 611
EE+RQ+ EEA K+R+ L + T + ++K G S A + +K E +E
Sbjct: 537 EERRQKREEARKRREEKLAKKGPTTSTSSSRKRRRKFNRNGRSAAIKAAASKLSENEDET 596
Query: 612 KK 617
K
Sbjct: 597 TK 598
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +3
Query: 471 KRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIR 635
+++A +++K+ + TIQ+ E+F +LE K KEQ E+ S +++
Sbjct: 214 QQKAQQESLKETLQEQEKETIQQLEEDFKAQLNELEVEKAKEQTALEEMKSFTVK 268
>SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2391
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +2
Query: 485 APGHE--RCQQDRTQLHHPKEERKLRFE 562
APGH+ RC QD +L+ K ERK R E
Sbjct: 1105 APGHQPLRCLQDVEELYLSKVERKDRLE 1132
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 429 DIEEKRQRLEEAEKKRQAMLQAMKD 503
D+EEK + LEEA+ + +A+ MKD
Sbjct: 522 DLEEKAKELEEAKSENEAISGKMKD 546
>SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 435 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLE 605
EEKR EEA K+++++ + + + K T +K+ E ++ N+ ++ E
Sbjct: 459 EEKRTESEEAPKRKKSLKRRLSFSRKNKAKKTEEKQDEEGEAREGTMDDNEVSQKPE 515
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +3
Query: 450 RLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 617
R + E++RQA + ++DA + I+++ E A LER + +E+ E ++
Sbjct: 574 RRQRTERQRQAKAREVRDAREKERQDRIRRERERIARERA-LERERERERERERER 628
>SB_2413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 493
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +3
Query: 165 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRA 284
PA ++EGEG+P+ +R+ Q + ++Q K + +K ++
Sbjct: 56 PANEEEGEGEPKPKRRKAQPSAPKEKQTKSRKRDKKKDKS 95
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/57 (24%), Positives = 31/57 (54%)
Frame = +3
Query: 456 EEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISL 626
EE +++Q Q + + K I +++ + +LE++ +K+Q+EE+K + L
Sbjct: 344 EEQAQRKQLEKQLVDSSKKFEKENQILMEADEL-IKTLKLEKSSSKQQIEEQKNVCL 399
>SB_22747| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-06)
Length = 337
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 366 RGAFLLRHEKPCAWPASL*GV 304
RGA L R+E PC W A L G+
Sbjct: 69 RGAALQRNEPPCMWIAILNGI 89
>SB_53672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 519 PNFTIQKKSENFGLSNAQLERNKTKEQLEEE 611
P T + EN GLSN L ++KTK E+
Sbjct: 498 PTPTSSQTQENIGLSNGTLTQDKTKPGCSED 528
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/68 (23%), Positives = 36/68 (52%)
Frame = +3
Query: 438 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 617
++++RLE +KK Q L+ + K +K+ E +LE+ + KE+ + +K+
Sbjct: 339 KEKERLEAKQKKEQERLEKQAEKEKKEKERLEKKQRE----EKDRLEKKEKKEEEKRKKE 394
Query: 618 ISLSIRIK 641
++ +I+
Sbjct: 395 EEINAKIE 402
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,530,785
Number of Sequences: 59808
Number of extensions: 228009
Number of successful extensions: 958
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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