Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30598
(618 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 409 e-115
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 408 e-114
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 408 e-114
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 405 e-113
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 403 e-113
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 403 e-113
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 400 e-112
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 400 e-112
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 400 e-112
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 371 e-103
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 328 1e-90
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 322 1e-88
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 227 5e-60
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 161 4e-40
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 130 7e-31
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 115 3e-26
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 95 3e-20
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 81 4e-16
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 70 1e-12
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 70 1e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 68 6e-12
At5g43500.2 68418.m05318 expressed protein 36 0.028
At5g43500.1 68418.m05319 expressed protein 36 0.028
At3g24130.1 68416.m03030 pectinesterase family protein contains ... 29 2.5
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 2.5
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 29 2.5
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 29 2.5
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.5
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.5
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 29 3.3
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 29 3.3
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 28 5.7
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 28 5.7
At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1 (... 27 7.5
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 27 10.0
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 27 10.0
At3g15400.1 68416.m01954 anther development protein, putative si... 27 10.0
At2g39480.1 68415.m04845 ABC transporter family protein related ... 27 10.0
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 10.0
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 409 bits (1007), Expect = e-115
Identities = 190/205 (92%), Positives = 200/205 (97%)
Frame = +3
Query: 3 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE 182
H GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPE
Sbjct: 42 HTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE 101
Query: 183 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 362
EHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV
Sbjct: 102 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
Query: 363 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 542
SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT+AEREIVRD+KEKL Y+
Sbjct: 162 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYI 221
Query: 543 ALDFEQEMATAAASTSLEKSYELPD 617
ALD+EQEM TA S+S+EKSYELPD
Sbjct: 222 ALDYEQEMETANTSSSVEKSYELPD 246
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 408 bits (1005), Expect = e-114
Identities = 189/205 (92%), Positives = 199/205 (97%)
Frame = +3
Query: 3 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE 182
H GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPE
Sbjct: 42 HTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPE 101
Query: 183 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 362
EHP+LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV
Sbjct: 102 EHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
Query: 363 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 542
SHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIKEKLCY+
Sbjct: 162 SHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYI 221
Query: 543 ALDFEQEMATAAASTSLEKSYELPD 617
ALD+EQE+ TA S+S+EK+YELPD
Sbjct: 222 ALDYEQELETAKTSSSVEKNYELPD 246
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 408 bits (1005), Expect = e-114
Identities = 189/205 (92%), Positives = 199/205 (97%)
Frame = +3
Query: 3 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE 182
H GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPE
Sbjct: 42 HTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPE 101
Query: 183 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 362
EHP+LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV
Sbjct: 102 EHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
Query: 363 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 542
SHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIKEKLCY+
Sbjct: 162 SHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYI 221
Query: 543 ALDFEQEMATAAASTSLEKSYELPD 617
ALD+EQE+ TA S+S+EK+YELPD
Sbjct: 222 ALDYEQELETAKTSSSVEKNYELPD 246
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 405 bits (996), Expect = e-113
Identities = 188/205 (91%), Positives = 199/205 (97%)
Frame = +3
Query: 3 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE 182
H GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPE
Sbjct: 42 HTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPE 101
Query: 183 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 362
EHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV
Sbjct: 102 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
Query: 363 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 542
SHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL Y+
Sbjct: 162 SHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYI 221
Query: 543 ALDFEQEMATAAASTSLEKSYELPD 617
ALDFEQE+ T+ S+S+EKS+ELPD
Sbjct: 222 ALDFEQELETSKTSSSVEKSFELPD 246
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 403 bits (993), Expect = e-113
Identities = 187/205 (91%), Positives = 199/205 (97%)
Frame = +3
Query: 3 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE 182
H GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPE
Sbjct: 42 HTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPE 101
Query: 183 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 362
EHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV
Sbjct: 102 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
Query: 363 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 542
SHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL Y+
Sbjct: 162 SHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYI 221
Query: 543 ALDFEQEMATAAASTSLEKSYELPD 617
ALD+EQE+ T+ S+S+EKS+ELPD
Sbjct: 222 ALDYEQELETSKTSSSVEKSFELPD 246
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 403 bits (992), Expect = e-113
Identities = 189/205 (92%), Positives = 198/205 (96%)
Frame = +3
Query: 3 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE 182
H GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPE
Sbjct: 42 HTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE 101
Query: 183 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 362
EHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV
Sbjct: 102 EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
Query: 363 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 542
SHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRDIKEKL YV
Sbjct: 162 SHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYV 221
Query: 543 ALDFEQEMATAAASTSLEKSYELPD 617
ALD+EQE+ TA +S+S+EK+YELPD
Sbjct: 222 ALDYEQELETAKSSSSVEKNYELPD 246
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 400 bits (985), Expect = e-112
Identities = 184/205 (89%), Positives = 198/205 (96%)
Frame = +3
Query: 3 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE 182
H GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APE
Sbjct: 42 HHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPE 101
Query: 183 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 362
EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV
Sbjct: 102 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
Query: 363 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 542
SHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +V
Sbjct: 162 SHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFV 221
Query: 543 ALDFEQEMATAAASTSLEKSYELPD 617
A+D+EQEM T+ S+S+EK+YELPD
Sbjct: 222 AVDYEQEMETSKTSSSIEKNYELPD 246
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 400 bits (985), Expect = e-112
Identities = 184/205 (89%), Positives = 198/205 (96%)
Frame = +3
Query: 3 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE 182
H GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APE
Sbjct: 42 HHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPE 101
Query: 183 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 362
EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV
Sbjct: 102 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
Query: 363 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 542
SHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +V
Sbjct: 162 SHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFV 221
Query: 543 ALDFEQEMATAAASTSLEKSYELPD 617
A+D+EQEM T+ S+S+EK+YELPD
Sbjct: 222 AVDYEQEMETSKTSSSIEKNYELPD 246
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 400 bits (985), Expect = e-112
Identities = 184/205 (89%), Positives = 198/205 (96%)
Frame = +3
Query: 3 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE 182
H GVMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APE
Sbjct: 42 HHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPE 101
Query: 183 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 362
EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV
Sbjct: 102 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 161
Query: 363 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 542
SHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +V
Sbjct: 162 SHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFV 221
Query: 543 ALDFEQEMATAAASTSLEKSYELPD 617
A+D+EQEM T+ S+S+EK+YELPD
Sbjct: 222 AVDYEQEMETSKTSSSIEKNYELPD 246
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 371 bits (913), Expect = e-103
Identities = 163/205 (79%), Positives = 193/205 (94%)
Frame = +3
Query: 3 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE 182
H+GVMVGM +KD++VGDEAQ++RGIL+LKYPIEHG+++NWDDMEKIWHHTFYNELR+ PE
Sbjct: 43 HRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPE 102
Query: 183 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 362
EHP+LLTEAPLNPK NREKMTQIMFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGV
Sbjct: 103 EHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGV 162
Query: 363 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 542
SHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++TT+AEREIVRDIKEKLCY+
Sbjct: 163 SHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIVRDIKEKLCYI 222
Query: 543 ALDFEQEMATAAASTSLEKSYELPD 617
A+D+EQEM A S++++++YELPD
Sbjct: 223 AVDYEQEMEKATTSSAIDRTYELPD 247
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 328 bits (807), Expect = 1e-90
Identities = 147/199 (73%), Positives = 174/199 (87%)
Frame = +3
Query: 21 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 200
G+ +SYVG+E + R ILTLK P+EHGI+ NWDDMEKIWH+TFYNELRV PEEHPVLL
Sbjct: 37 GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLL 96
Query: 201 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 380
TEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+
Sbjct: 97 TEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPV 156
Query: 381 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 560
YEGYALPH ILRLDL GRDLTDYL++I+TERGY++TT+AEREIVRDIKEKLCYVALD+EQ
Sbjct: 157 YEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIVRDIKEKLCYVALDYEQ 216
Query: 561 EMATAAASTSLEKSYELPD 617
EM +++K+Y LPD
Sbjct: 217 EMEKTTKGWTIDKTYVLPD 235
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 322 bits (791), Expect = 1e-88
Identities = 147/201 (73%), Positives = 178/201 (88%)
Frame = +3
Query: 15 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 194
MVGM + D +VGD+A+++ GILTL YP+EHG+++NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 195 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 374
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ V
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIV 120
Query: 375 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 554
PIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY T+AERE+VRDIKE+ Y+ALD+
Sbjct: 121 PIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TSAEREVVRDIKEQFGYIALDY 177
Query: 555 EQEMATAAASTSLEKSYELPD 617
EQEM A S++++++YELPD
Sbjct: 178 EQEMEKATKSSAIDRTYELPD 198
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 227 bits (555), Expect = 5e-60
Identities = 97/195 (49%), Positives = 137/195 (70%)
Frame = +3
Query: 33 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 212
KD VG+ R L + YP+ +GI+ NWDDME +W H FYNEL++ P + +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 213 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 392
LNP NREKM + MFE +N +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY
Sbjct: 111 LNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGY 170
Query: 393 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 572
+ PH R+++AGR +T YL+ +L+ RGY+ TA+ E VR+IKEKLCY++ D+++E
Sbjct: 171 SFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETVREIKEKLCYISYDYKRESQL 230
Query: 573 AAASTSLEKSYELPD 617
+T L K+Y LPD
Sbjct: 231 GLETTILVKNYTLPD 245
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 161 bits (390), Expect = 4e-40
Identities = 78/184 (42%), Positives = 113/184 (61%), Gaps = 8/184 (4%)
Frame = +3
Query: 36 DSYVGDEAQSK-RGILT--LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 206
D Y+GDEA +K R T L YPIEHG + +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 207 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHT 371
+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG +H
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHV 186
Query: 372 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 551
VP+ EGY + I + +AG+D+T ++ +++ ERG + ++ R +KE CY D
Sbjct: 187 VPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYCYTCSD 246
Query: 552 FEQE 563
+E
Sbjct: 247 IVKE 250
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 130 bits (314), Expect = 7e-31
Identities = 60/146 (41%), Positives = 93/146 (63%), Gaps = 1/146 (0%)
Frame = +3
Query: 42 YVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 218
YVG +A S +R + + PI+ GI+++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 219 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 398
+ REK ++MFE + PA+++A VL+ +A+GR T +V+D G G + P+++GY L
Sbjct: 136 TQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVL 195
Query: 399 PHAILRLDLAGRDLTDYLMKILTERG 476
A++ L G LTD L+K L +G
Sbjct: 196 QKAVVSSPLGGEFLTDCLLKSLESKG 221
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 115 bits (276), Expect = 3e-26
Identities = 66/189 (34%), Positives = 106/189 (56%), Gaps = 11/189 (5%)
Frame = +3
Query: 84 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 263
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 264 FNSPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAIL 413
F ++Y+A Q+++ LY + R +V+D G +H VP+ + L HAI
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIK 180
Query: 414 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSL 593
R+DL G+ T+YL ++++ R S E +V D KEKLC+V+LD +++ A +L
Sbjct: 181 RIDLGGKAFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNGNTL 238
Query: 594 EKS-YELPD 617
KS Y LPD
Sbjct: 239 IKSTYVLPD 247
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 95.1 bits (226), Expect = 3e-20
Identities = 62/176 (35%), Positives = 85/176 (48%), Gaps = 1/176 (0%)
Frame = +3
Query: 93 PIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 269
PIE G+I +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 270 SPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 449
Y + QAVLSLYA GR +G +D G G P+ EG A R +L G +LT
Sbjct: 117 VSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELTKL 176
Query: 450 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 617
+ L + S + V +KE+ A E E+A + + LPD
Sbjct: 177 FAQELGKTNPSMNLSMSD--VEKLKEQYANCA---EDEIAYKKTQNCEIEQHTLPD 227
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 81.4 bits (192), Expect = 4e-16
Identities = 46/164 (28%), Positives = 84/164 (51%), Gaps = 6/164 (3%)
Frame = +3
Query: 93 PIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 269
P + ++ ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 270 SPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 434
PA+ + A S L+ + GIVL G +H++P +G + R ++ G
Sbjct: 145 VPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGY 204
Query: 435 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 566
+TDYL ++L+ + ++ E D+K + CY+A D+ E+
Sbjct: 205 HVTDYLKQLLSLKYPFHSSRFTWEKAEDLKLEHCYIAPDYASEI 248
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 70.1 bits (164), Expect = 1e-12
Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Frame = +3
Query: 150 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 299
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 300 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 476
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 477 YSFTTTAEREIVRDIKEKLCYVALDFEQEMA 569
SF + VR +KEKLCYVALD++ E++
Sbjct: 301 ISFQSL---YTVRTLKEKLCYVALDYKAELS 328
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 70.1 bits (164), Expect = 1e-12
Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Frame = +3
Query: 150 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 299
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 300 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 476
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 477 YSFTTTAEREIVRDIKEKLCYVALDFEQEMA 569
SF + VR +KEKLCYVALD++ E++
Sbjct: 301 ISFQSL---YTVRTLKEKLCYVALDYKAELS 328
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 67.7 bits (158), Expect = 6e-12
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +3
Query: 27 GQKDSYVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 203
G++ Y G +A + +R + + P + GI+T+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 204 EAPLNPKANREK 239
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 35.5 bits (78), Expect = 0.028
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +3
Query: 186 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 365
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 238 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 296
Query: 366 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 461
V + +G +LP+ L G D+ L+ I
Sbjct: 297 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 35.5 bits (78), Expect = 0.028
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +3
Query: 186 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 365
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 250 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 308
Query: 366 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 461
V + +G +LP+ L G D+ L+ I
Sbjct: 309 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At3g24130.1 68416.m03030 pectinesterase family protein contains
Pfam profile: PF01095 Pectinesterase
Length = 335
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 500 LSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 372
L G G+R+T + D H V Q T ++ V +S+TF + Y
Sbjct: 86 LVGAGKRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSY 128
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 245 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPD 138
G+ + VG+G+ GG G+ GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 501 REIVRDIKEKLCYVALDFEQEMATAAASTSLE 596
R +++D KE+ C+ + ++ +A A AST++E
Sbjct: 826 RNLIQDAKERGCFHSAGEDESLAQAIASTNIE 857
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -2
Query: 257 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 132
+HDL GHLL P+G+ EG E G DT+ + GV D +
Sbjct: 760 EHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYM 804
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 51 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 230
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 231 REK 239
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 51 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 230
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 231 REK 239
REK
Sbjct: 225 REK 227
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 368 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 484
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 368 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 484
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 27.9 bits (59), Expect = 5.7
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -3
Query: 388 PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATY-MAGELKVSNMIWVIFSLLALGLR 212
PS + V ++PS S +PVV + S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 211 GASVSST---GCSSGAT 170
G +VS G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 27.9 bits (59), Expect = 5.7
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 4/145 (2%)
Frame = +3
Query: 183 EHPVLLTEAPLNPKANREKMTQIMFE--TFNSPAM--YVAIQAVLSLYASGRTTGIVLDS 350
+ P ++ + PL+ K + I F+ TF+ P+ + + + SG+T +V S
Sbjct: 344 QRPTIIQD-PLDGKCLDQVHGNIEFKDVTFSYPSRPDVMIFRNFNIFFPSGKTVAVVGGS 402
Query: 351 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 530
G G S V + E + P++ ++ L G ++ +K L E+ I E
Sbjct: 403 GSGKSTVVSLIERFYDPNS-GQILLDGVEIKTLQLKFLREQ-IGLVNQEPALFATTILEN 460
Query: 531 LCYVALDFEQEMATAAASTSLEKSY 605
+ Y D AAAS + S+
Sbjct: 461 ILYGKPDATMVEVEAAASAANAHSF 485
>At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1
(PLDALPHA1) (PLD1) / choline phosphatase 1 identical to
SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4)
(AtPLDalpha1) (PLD alpha 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
(PLDalpha) [Arabidopsis thaliana]
Length = 810
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 257 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 132
+HDL GHLL P+G+ EG E G DT+ + G D L
Sbjct: 760 EHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYL 804
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 27.1 bits (57), Expect = 10.0
Identities = 18/80 (22%), Positives = 32/80 (40%)
Frame = +3
Query: 117 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 296
NW +E + + + P LL EA + PK+ E Q +++TF + + +
Sbjct: 494 NWSYIEFVDNKDVLELIEKKPGGVIALLDEACMFPKSTHETFAQKLYQTFKNYKRFTKPK 553
Query: 297 AVLSLYASGRTTGIVLDSGD 356
+ +A G V D
Sbjct: 554 LSRTSFAISHYAGEVTYQAD 573
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 435 DLTDYL-MKILTERGYSFTTTAEREI-VRDIKEKLCY 539
D TD + +KI + T + ER I VRD+K+ +CY
Sbjct: 6 DFTDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICY 42
>At3g15400.1 68416.m01954 anther development protein, putative
similar to anther development protein ATA20 GB:AAC50042
GI:2708813 from [Arabidopsis thaliana]
Length = 416
Score = 27.1 bits (57), Expect = 10.0
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Frame = -2
Query: 497 SGGGERVTPLGEDLHEVVGQVATSQVQTEDG--VGQSVTFVDGYGVGDTISGVEHDTG-G 327
S GE P + + + Q S+++ ED + + + G G G SGV + G G
Sbjct: 166 SMSGESKHPEHKVKPDQIMQTMASELEEEDPDHTSKPMGYGVGRGYGSGGSGVGYGVGIG 225
Query: 326 TTGGVQRXXXXXXXXXXXXXXXLKHDLGHLLPVGLGVEGGFGEQHGVLLGGDTQL-IVEG 150
++GG + G G+G GG G G+ GG T + I EG
Sbjct: 226 SSGGSGFGEGIGSSGGNGFGEGIGSSGGSGFGEGIGSSGGSGFGEGIGSGGGTGIGIGEG 285
Query: 149 V 147
+
Sbjct: 286 I 286
>At2g39480.1 68415.m04845 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1407
Score = 27.1 bits (57), Expect = 10.0
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 321 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 464
G+T +V SG G S + + E Y P A L L GRDL Y ++ L
Sbjct: 1186 GQTVAVVGVSGSGKSTIISLIERYYDPVAGQVL-LDGRDLKSYNLRWL 1232
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 117 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 266
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,205,138
Number of Sequences: 28952
Number of extensions: 250673
Number of successful extensions: 925
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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