Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30592
(569 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X76228-1|CAA53814.1| 226|Homo sapiens vacuolar H+ ATPase E subu... 149 5e-36
X71491-1|CAA50592.1| 226|Homo sapiens vacuolar proton ATPase pr... 149 5e-36
CR456385-1|CAG30271.1| 226|Homo sapiens ATP6E protein. 149 5e-36
BT007128-1|AAP35792.1| 226|Homo sapiens ATPase, H+ transporting... 149 5e-36
BC004443-1|AAH04443.1| 226|Homo sapiens ATPase, H+ transporting... 149 5e-36
BC034808-1|AAH34808.1| 226|Homo sapiens ATPase, H+ transporting... 132 8e-31
BC008981-1|AAH08981.1| 226|Homo sapiens ATPase, H+ transporting... 132 8e-31
AK058055-1|BAB71643.1| 226|Homo sapiens protein ( Homo sapiens ... 132 8e-31
AC018682-1|AAY14833.1| 226|Homo sapiens unknown protein. 132 8e-31
AB074759-1|BAC00847.1| 226|Homo sapiens V-ATPase E1 subunit pro... 132 8e-31
BC112028-1|AAI12029.1| 259|Homo sapiens hypothetical protein FL... 34 0.40
BC112026-1|AAI12027.1| 259|Homo sapiens hypothetical protein LO... 34 0.40
AK097823-1|BAC05178.1| 259|Homo sapiens protein ( Homo sapiens ... 34 0.40
BC113448-1|AAI13449.1| 99|Homo sapiens late cornified envelope... 30 5.0
BC113446-1|AAI13447.1| 99|Homo sapiens late cornified envelope... 30 5.0
AL139247-8|CAI21686.1| 99|Homo sapiens late cornified envelope... 30 5.0
AJ320497-1|CAC60121.1| 4523|Homo sapiens axonemal beta heavy cha... 30 6.6
DQ493870-1|ABF48723.1| 2458|Homo sapiens acetyl-Coenzyme A carbo... 29 8.7
BC063447-1|AAH63447.1| 867|Homo sapiens CTD (carboxy-terminal d... 29 8.7
BC028417-1|AAH28417.1| 858|Homo sapiens ACACB protein protein. 29 8.7
AY382667-1|AAR37018.1| 2458|Homo sapiens acetyl-CoA carboxylase ... 29 8.7
AJ575592-1|CAE01471.3| 2458|Homo sapiens Acetyl-CoA carboxylase ... 29 8.7
AF154115-1|AAD42088.1| 961|Homo sapiens RNA polymerase II CTD p... 29 8.7
AB209110-1|BAD92347.1| 1689|Homo sapiens Acetyl-CoA carboxylase ... 29 8.7
>X76228-1|CAA53814.1| 226|Homo sapiens vacuolar H+ ATPase E subunit
protein.
Length = 226
Score = 149 bits (362), Expect = 5e-36
Identities = 81/166 (48%), Positives = 106/166 (63%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
LSDADVQKQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 426
IQ SN++NQARLKVL+ R+D + ++L+EA++RL++V KDT Y LL L++Q
Sbjct: 63 QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122
Query: 427 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVD 564
L+QL+EP + +R R+ D LV++ + KA YK K DV +++D
Sbjct: 123 GLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQID 168
>X71491-1|CAA50592.1| 226|Homo sapiens vacuolar proton ATPase
protein.
Length = 226
Score = 149 bits (362), Expect = 5e-36
Identities = 81/166 (48%), Positives = 106/166 (63%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
LSDADVQKQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDADVQKQIKHMMAFIEQEANEKAEEIDRKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 426
IQ SN++NQARLKVL+ R+D + ++L+EA++RL++V KDT Y LL L++Q
Sbjct: 63 QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122
Query: 427 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVD 564
L+QL+EP + +R R+ D LV++ + KA YK K DV +++D
Sbjct: 123 GLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQID 168
>CR456385-1|CAG30271.1| 226|Homo sapiens ATP6E protein.
Length = 226
Score = 149 bits (362), Expect = 5e-36
Identities = 81/166 (48%), Positives = 106/166 (63%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
LSDADVQKQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 426
IQ SN++NQARLKVL+ R+D + ++L+EA++RL++V KDT Y LL L++Q
Sbjct: 63 QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122
Query: 427 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVD 564
L+QL+EP + +R R+ D LV++ + KA YK K DV +++D
Sbjct: 123 GLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQID 168
>BT007128-1|AAP35792.1| 226|Homo sapiens ATPase, H+ transporting,
lysosomal 31kDa, V1 subunit E isoform 1 protein.
Length = 226
Score = 149 bits (362), Expect = 5e-36
Identities = 81/166 (48%), Positives = 106/166 (63%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
LSDADVQKQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 426
IQ SN++NQARLKVL+ R+D + ++L+EA++RL++V KDT Y LL L++Q
Sbjct: 63 QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122
Query: 427 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVD 564
L+QL+EP + +R R+ D LV++ + KA YK K DV +++D
Sbjct: 123 GLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQID 168
>BC004443-1|AAH04443.1| 226|Homo sapiens ATPase, H+ transporting,
lysosomal 31kDa, V1 subunit E1 protein.
Length = 226
Score = 149 bits (362), Expect = 5e-36
Identities = 81/166 (48%), Positives = 106/166 (63%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
LSDADVQKQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 426
IQ SN++NQARLKVL+ R+D + ++L+EA++RL++V KDT Y LL L++Q
Sbjct: 63 QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122
Query: 427 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVD 564
L+QL+EP + +R R+ D LV++ + KA YK K DV +++D
Sbjct: 123 GLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQID 168
>BC034808-1|AAH34808.1| 226|Homo sapiens ATPase, H+ transporting,
lysosomal 31kDa, V1 subunit E2 protein.
Length = 226
Score = 132 bits (319), Expect = 8e-31
Identities = 73/166 (43%), Positives = 97/166 (58%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
LSD DV+KQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 426
I S M NQARLKVL+ R D + ++L EA+ RL+ + +D ++Y LL L++Q
Sbjct: 63 QIEQQKKILMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQ 122
Query: 427 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVD 564
L +L+EP + +R R D LVE+ + KA +Y +K V +++D
Sbjct: 123 GLLRLLEPVMIVRCRPQDLLLVEAAVQKAIPEYMTISQKHVEVQID 168
>BC008981-1|AAH08981.1| 226|Homo sapiens ATPase, H+ transporting,
lysosomal 31kDa, V1 subunit E2 protein.
Length = 226
Score = 132 bits (319), Expect = 8e-31
Identities = 73/166 (43%), Positives = 97/166 (58%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
LSD DV+KQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 426
I S M NQARLKVL+ R D + ++L EA+ RL+ + +D ++Y LL L++Q
Sbjct: 63 QIEQQKKILMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQ 122
Query: 427 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVD 564
L +L+EP + +R R D LVE+ + KA +Y +K V +++D
Sbjct: 123 GLLRLLEPVMIVRCRPQDLLLVEAAVQKAIPEYMTISQKHVEVQID 168
>AK058055-1|BAB71643.1| 226|Homo sapiens protein ( Homo sapiens
cDNA FLJ25326 fis, clone TST00424. ).
Length = 226
Score = 132 bits (319), Expect = 8e-31
Identities = 73/166 (43%), Positives = 97/166 (58%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
LSD DV+KQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 426
I S M NQARLKVL+ R D + ++L EA+ RL+ + +D ++Y LL L++Q
Sbjct: 63 QIEQQKKILMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQ 122
Query: 427 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVD 564
L +L+EP + +R R D LVE+ + KA +Y +K V +++D
Sbjct: 123 GLLRLLEPVMIVRCRPQDLLLVEAAVQKAIPEYMTISQKHVEVQID 168
>AC018682-1|AAY14833.1| 226|Homo sapiens unknown protein.
Length = 226
Score = 132 bits (319), Expect = 8e-31
Identities = 73/166 (43%), Positives = 97/166 (58%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
LSD DV+KQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 426
I S M NQARLKVL+ R D + ++L EA+ RL+ + +D ++Y LL L++Q
Sbjct: 63 QIEQQKKILMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQ 122
Query: 427 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVD 564
L +L+EP + +R R D LVE+ + KA +Y +K V +++D
Sbjct: 123 GLLRLLEPVMIVRCRPQDLLLVEAAVQKAIPEYMTISQKHVEVQID 168
>AB074759-1|BAC00847.1| 226|Homo sapiens V-ATPase E1 subunit
protein.
Length = 226
Score = 132 bits (319), Expect = 8e-31
Identities = 73/166 (43%), Positives = 97/166 (58%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
LSD DV+KQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 426
I S M NQARLKVL+ R D + ++L EA+ RL+ + +D ++Y LL L++Q
Sbjct: 63 QIEQQKKILMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQ 122
Query: 427 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVD 564
L +L+EP + +R R D LVE+ + KA +Y +K V +++D
Sbjct: 123 GLLRLLEPVMIVRCRPQDLLLVEAAVQKAIPEYMTISQKHVEVQID 168
>BC112028-1|AAI12029.1| 259|Homo sapiens hypothetical protein
FLJ40504 protein.
Length = 259
Score = 33.9 bits (74), Expect = 0.40
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Frame = -2
Query: 409 PAALSTVW------CPLALQPGACELRQVHYVRDLHELSVPSDELGS-ACSKIGSS 263
P+AL+ W CPLAL PG EL H + LH+L VP G+ C+++ SS
Sbjct: 15 PSALTKNWPSKPESCPLALLPGQHELH--HLLHPLHQLPVPGHCPGTQLCAQLVSS 68
>BC112026-1|AAI12027.1| 259|Homo sapiens hypothetical protein
LOC284085 protein.
Length = 259
Score = 33.9 bits (74), Expect = 0.40
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Frame = -2
Query: 409 PAALSTVW------CPLALQPGACELRQVHYVRDLHELSVPSDELGS-ACSKIGSS 263
P+AL+ W CPLAL PG EL H + LH+L VP G+ C+++ SS
Sbjct: 15 PSALTKNWPSKPESCPLALLPGQHELH--HLLHPLHQLPVPGHCPGTQLCAQLVSS 68
>AK097823-1|BAC05178.1| 259|Homo sapiens protein ( Homo sapiens
cDNA FLJ40504 fis, clone TESTI2045509, highly similar to
KERATIN, TYPE I CYTOSKELETAL 18. ).
Length = 259
Score = 33.9 bits (74), Expect = 0.40
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Frame = -2
Query: 409 PAALSTVW------CPLALQPGACELRQVHYVRDLHELSVPSDELGS-ACSKIGSS 263
P+AL+ W CPLAL PG EL H + LH+L VP G+ C+++ SS
Sbjct: 15 PSALTKNWPSKPESCPLALLPGQHELH--HLLHPLHQLPVPGHCPGTQLCAQLVSS 68
>BC113448-1|AAI13449.1| 99|Homo sapiens late cornified envelope 4A
protein.
Length = 99
Score = 30.3 bits (65), Expect = 5.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 372 SAKGHQTVLRAAGHTYCAGSLPAHGTHCHHPRASNRQGSG 491
S+ G + G C H +HCH P++SN GSG
Sbjct: 43 SSSGGCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSG 82
>BC113446-1|AAI13447.1| 99|Homo sapiens late cornified envelope 4A
protein.
Length = 99
Score = 30.3 bits (65), Expect = 5.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 372 SAKGHQTVLRAAGHTYCAGSLPAHGTHCHHPRASNRQGSG 491
S+ G + G C H +HCH P++SN GSG
Sbjct: 43 SSSGGCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSG 82
>AL139247-8|CAI21686.1| 99|Homo sapiens late cornified envelope 4A
protein.
Length = 99
Score = 30.3 bits (65), Expect = 5.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 372 SAKGHQTVLRAAGHTYCAGSLPAHGTHCHHPRASNRQGSG 491
S+ G + G C H +HCH P++SN GSG
Sbjct: 43 SSSGGCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSG 82
>AJ320497-1|CAC60121.1| 4523|Homo sapiens axonemal beta heavy chain
dynein type 11 protein.
Length = 4523
Score = 29.9 bits (64), Expect = 6.6
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 331 VRNVLDEARKRLAEVPK-DT-KLYSELLVTLIVQALFQLMEPTVTIRVRQTDKALVESLL 504
+ N+++E RK P DT K+Y E + ++V+ FQ + + ++ T+K L +
Sbjct: 884 IHNLVEENRKLFKANPSLDTWKIYVEFIDDIVVEGFFQAIMHDLDFFLKNTEKQLKPAPF 943
Query: 505 GKAQ 516
+AQ
Sbjct: 944 FQAQ 947
>DQ493870-1|ABF48723.1| 2458|Homo sapiens acetyl-Coenzyme A
carboxylase 2 protein.
Length = 2458
Score = 29.5 bits (63), Expect = 8.7
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +1
Query: 322 EDHVRNVLDEARKRLAEVPKDTKLYSELLVTL 417
ED RN DE A VPKDT L+SE +L
Sbjct: 1376 EDFTRN-FDEVISCFANVPKDTPLFSEARTSL 1406
>BC063447-1|AAH63447.1| 867|Homo sapiens CTD (carboxy-terminal
domain, RNA polymerase II, polypeptide A) phosphatase,
su protein.
Length = 867
Score = 29.5 bits (63), Expect = 8.7
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Frame = -2
Query: 448 VP*AGREPAQ*V*PAALSTVWCP-------LALQPGACELRQVHYVRDLHELSVPSDELG 290
VP AGR PA+ AA++ V CP L + A ++ V + E + + G
Sbjct: 3 VPAAGRVPAEGAPTAAVAEVRCPGPAPLRLLEWRVAAGAAVRIGSVLAVFEAAASAQSAG 62
Query: 289 SACSKIGSSSEVQPASP 239
++ S++ S V+PA P
Sbjct: 63 ASQSRVASGGCVRPARP 79
>BC028417-1|AAH28417.1| 858|Homo sapiens ACACB protein protein.
Length = 858
Score = 29.5 bits (63), Expect = 8.7
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +1
Query: 322 EDHVRNVLDEARKRLAEVPKDTKLYSELLVTL 417
ED RN DE A VPKDT L+SE +L
Sbjct: 42 EDFTRN-FDEVISCFANVPKDTPLFSEARTSL 72
>AY382667-1|AAR37018.1| 2458|Homo sapiens acetyl-CoA carboxylase 2
protein.
Length = 2458
Score = 29.5 bits (63), Expect = 8.7
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +1
Query: 322 EDHVRNVLDEARKRLAEVPKDTKLYSELLVTL 417
ED RN DE A VPKDT L+SE +L
Sbjct: 1376 EDFTRN-FDEVISCFANVPKDTPLFSEARTSL 1406
>AJ575592-1|CAE01471.3| 2458|Homo sapiens Acetyl-CoA carboxylase 2
protein.
Length = 2458
Score = 29.5 bits (63), Expect = 8.7
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +1
Query: 322 EDHVRNVLDEARKRLAEVPKDTKLYSELLVTL 417
ED RN DE A VPKDT L+SE +L
Sbjct: 1376 EDFTRN-FDEVISCFANVPKDTPLFSEARTSL 1406
>AF154115-1|AAD42088.1| 961|Homo sapiens RNA polymerase II CTD
phosphatase protein.
Length = 961
Score = 29.5 bits (63), Expect = 8.7
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Frame = -2
Query: 448 VP*AGREPAQ*V*PAALSTVWCP-------LALQPGACELRQVHYVRDLHELSVPSDELG 290
VP AGR PA+ AA++ V CP L + A ++ V + E + + G
Sbjct: 3 VPAAGRVPAEGAPTAAVAEVRCPGPAPLRLLEWRVAAGAAVRIGSVLAVFEAAASAQSAG 62
Query: 289 SACSKIGSSSEVQPASP 239
++ S++ S V+PA P
Sbjct: 63 ASQSRVASGGCVRPARP 79
>AB209110-1|BAD92347.1| 1689|Homo sapiens Acetyl-CoA carboxylase 2
variant protein.
Length = 1689
Score = 29.5 bits (63), Expect = 8.7
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +1
Query: 322 EDHVRNVLDEARKRLAEVPKDTKLYSELLVTL 417
ED RN DE A VPKDT L+SE +L
Sbjct: 607 EDFTRN-FDEVISCFANVPKDTPLFSEARTSL 637
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,112,078
Number of Sequences: 237096
Number of extensions: 1482800
Number of successful extensions: 4230
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4220
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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