Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30592
(569 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g11150.1 68417.m01807 vacuolar ATP synthase subunit E / V-ATP... 100 1e-21
At3g08560.1 68416.m00993 vacuolar ATP synthase subunit E, putati... 95 4e-20
At1g64200.1 68414.m07273 vacuolar ATP synthase subunit E, putati... 84 5e-17
At3g03790.2 68416.m00389 ankyrin repeat family protein / regulat... 29 2.9
At3g03790.1 68416.m00388 ankyrin repeat family protein / regulat... 29 2.9
At5g55540.1 68418.m06919 expressed protein 28 3.8
At5g16210.1 68418.m01894 HEAT repeat-containing protein contains... 28 3.8
At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR ... 28 5.0
At3g07610.1 68416.m00911 transcription factor jumonji (jmjC) dom... 28 5.0
At2g41990.1 68415.m05194 expressed protein 28 5.0
At2g02180.1 68415.m00154 tobamovirus multiplication protein 3 (T... 28 5.0
At3g58810.2 68416.m06555 zinc transporter, putative similar to z... 27 6.7
At3g58810.1 68416.m06554 zinc transporter, putative similar to z... 27 6.7
At1g77010.1 68414.m08968 pentatricopeptide (PPR) repeat-containi... 27 6.7
At1g18270.1 68414.m02280 ketose-bisphosphate aldolase class-II f... 27 8.8
>At4g11150.1 68417.m01807 vacuolar ATP synthase subunit E / V-ATPase
E subunit / vacuolar proton pump E subunit (VATE)
identical to SP|Q39258 Vacuolar ATP synthase subunit E
(EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump
E subunit) {Arabidopsis thaliana}
Length = 230
Score = 99.5 bits (237), Expect = 1e-21
Identities = 57/158 (36%), Positives = 83/158 (52%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
++D DV +QI+ M+ FI Q FNIEK +LV+ ++ KI
Sbjct: 1 MNDGDVSRQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQDYEKKEK 60
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 426
I S LN +R+KVL+ ++D V + D+A K L V +D Y +LL LIVQ
Sbjct: 61 QADVRKKIDYSMQLNASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLKDLIVQ 120
Query: 427 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIK 540
L +L EP+V +R R+ D LVE++L A+ +Y K K
Sbjct: 121 CLLRLKEPSVLLRCREEDLGLVEAVLDDAKEEYAGKAK 158
>At3g08560.1 68416.m00993 vacuolar ATP synthase subunit E, putative
/ V-ATPase E subunit, putative / vacuolar proton pump E
subunit, putative similar to SP|Q39258 Vacuolar ATP
synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit)
(Vacuolar proton pump E subunit) {Arabidopsis thaliana};
contains Pfam profile PF01991: ATP synthase (E/31 kDa)
subunit
Length = 235
Score = 94.7 bits (225), Expect = 4e-20
Identities = 53/158 (33%), Positives = 82/158 (51%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
++DADV KQI+ M+ FI Q FNIE+ +L++ + K+
Sbjct: 1 MNDADVSKQIQQMVRFIRQEAEEKANEISISAEEEFNIERLQLLESAKRKLRQDYDRKLK 60
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 426
I S LN +R+K L+ ++D V + D A K L V D Y +LL +LI++
Sbjct: 61 QVDIRKRIDYSTQLNASRIKYLQAQDDVVTAMKDSAAKDLLRVSNDKNNYKKLLKSLIIE 120
Query: 427 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIK 540
+L +L EP+V +R R+ DK +VES++ A+ Y K K
Sbjct: 121 SLLRLKEPSVLLRCREMDKKVVESVIEDAKRQYAEKAK 158
>At1g64200.1 68414.m07273 vacuolar ATP synthase subunit E, putative
/ V-ATPase E subunit, putative / vacuolar proton pump E
subunit, putative similar to SP|Q39258 Vacuolar ATP
synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit)
(Vacuolar proton pump E subunit) {Arabidopsis thaliana};
contains Pfam profile PF01991: ATP synthase (E/31 kDa)
subunit
Length = 237
Score = 84.2 bits (199), Expect = 5e-17
Identities = 56/164 (34%), Positives = 80/164 (48%), Gaps = 6/164 (3%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
++DAD QI+ M+ FI Q FNIEK +LV+ ++ KI
Sbjct: 1 MNDADASIQIQQMVRFIRQEAEEKANEISISSEEEFNIEKLQLVEAEKKKIRQEYEKKEK 60
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKL------YSELL 408
I S LN +R+KVL+ ++D V + +EA K+L +V + Y LL
Sbjct: 61 QVDVRKKIDYSMQLNASRIKVLQAQDDIVNAMKEEAAKQLLKVSQHGFFNHHHHQYKHLL 120
Query: 409 VTLIVQALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIK 540
LIVQ L +L EP V +R R+ D +VES+L A +Y K K
Sbjct: 121 KDLIVQCLLRLKEPAVLLRCREEDLDIVESMLDDASEEYCKKAK 164
>At3g03790.2 68416.m00389 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1081
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 9 ALYRPFFVLVVLKISSSHGAQRCRCSETDQAHDG 110
+LY P + +VLK S + A +CR E ++ +G
Sbjct: 508 SLYHPAYAPIVLKKSQTLQADKCREEENEELDEG 541
>At3g03790.1 68416.m00388 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1078
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 9 ALYRPFFVLVVLKISSSHGAQRCRCSETDQAHDG 110
+LY P + +VLK S + A +CR E ++ +G
Sbjct: 505 SLYHPAYAPIVLKKSQTLQADKCREEENEELDEG 538
>At5g55540.1 68418.m06919 expressed protein
Length = 1380
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 349 RQVHYVRDL-HELSVPSDELGSACSKIGSSSEVQPASPSFHSI 224
R+ H + +L EL VP+DE A + + ++E++ PSF I
Sbjct: 1084 RRYHDLHNLAQELQVPTDENPEADNHVPVTNELEKVDPSFGGI 1126
>At5g16210.1 68418.m01894 HEAT repeat-containing protein contains Pfam
profile PF02985: HEAT repeat
Length = 1180
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -3
Query: 561 HFQHNILLDLILVVCLGFSEQGLHQSLVGLTHA 463
HF+ ++++D ILV F E G H++++ + A
Sbjct: 962 HFKVDMIVDKILVQMDAFMEDGSHEAIIAVIRA 994
>At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 874
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 301 LKVLKVREDHVRNVLDEARKRLAEV 375
LK +KV+ED N+LDE ++ L+EV
Sbjct: 54 LKRIKVQEDRGLNLLDEVQQWLSEV 78
>At3g07610.1 68416.m00911 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 1027
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -3
Query: 561 HFQHNILLDLILVVCLGFSE--QGLHQSLVGLT 469
H QH L D++ V CL F E LH+ G T
Sbjct: 556 HVQHGSLKDVVAVDCLDFCEVKVNLHEFFTGYT 588
>At2g41990.1 68415.m05194 expressed protein
Length = 297
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -2
Query: 376 ALQPGACELRQVHYVRDLHELSVPSDELGSACSKIGSSS--EVQPASPSFHS 227
AL P +R ++YV+ V GS CS +GS + SP HS
Sbjct: 16 ALSPPRSAIRPLYYVQSPSNHDVEKMSFGSGCSLMGSPTHPHYYHCSPIHHS 67
>At2g02180.1 68415.m00154 tobamovirus multiplication protein 3
(TOM3) identical to tobamovirus multiplication protein
(TOM3) GI:15425641 from [Arabidopsis thaliana]
Length = 303
Score = 27.9 bits (59), Expect = 5.0
Identities = 9/34 (26%), Positives = 21/34 (61%)
Frame = -3
Query: 381 LWHFSQALASFVKYITYVIFTNFQYLQTSLVQHV 280
++HF + + V+ + +V N Q++Q ++QH+
Sbjct: 85 VFHFLNFVVNGVRAVVFVFRRNVQFMQPEILQHI 118
>At3g58810.2 68416.m06555 zinc transporter, putative similar to zinc
transporter 4; ZnT4 [Mus musculus]
gi|2582990|gb|AAB82593; similar to zinc transporter ZAT
[Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of
the cation diffusion facilitator (CDF) family, or cation
efflux (CE) family, PMID:11500563
Length = 393
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 382 PLALQPGACELRQVHYVRDLHELSVPSDELGSAC 281
P L+ G CE+ +V V +LH ++ +L AC
Sbjct: 323 PTMLEKGVCEIEEVVAVHELHIWAITVGKLLLAC 356
>At3g58810.1 68416.m06554 zinc transporter, putative similar to zinc
transporter 4; ZnT4 [Mus musculus]
gi|2582990|gb|AAB82593; similar to zinc transporter ZAT
[Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of
the cation diffusion facilitator (CDF) family, or cation
efflux (CE) family, PMID:11500563
Length = 432
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 382 PLALQPGACELRQVHYVRDLHELSVPSDELGSAC 281
P L+ G CE+ +V V +LH ++ +L AC
Sbjct: 362 PTMLEKGVCEIEEVVAVHELHIWAITVGKLLLAC 395
>At1g77010.1 68414.m08968 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 695
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = -2
Query: 358 CELRQVHYVRDLHELSVPSDELG-----SACSKIGS 266
C + + Y +H+L +P+DE+ SAC+ I S
Sbjct: 430 CTVETLEYFHQMHKLDLPTDEVSLSSVISACASISS 465
>At1g18270.1 68414.m02280 ketose-bisphosphate aldolase class-II
family protein low similarity to KbaY
(tagatose-1,6-bisphosphate aldolase) [Escherichia coli]
GI:8895753; contains Pfam profile PF01116:
Fructose-bisphosphate aldolase class-II
Length = 1373
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 385 CPLALQPGACELRQVHYVRDLHELSVPSDE 296
CP LQ G + VHYV D L VP+ E
Sbjct: 764 CPFFLQGGRYTIDDVHYVADSDRL-VPAGE 792
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,913,805
Number of Sequences: 28952
Number of extensions: 199862
Number of successful extensions: 590
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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