Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30591
(628 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 40 0.002
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 37 0.013
At3g29075.1 68416.m03637 glycine-rich protein 35 0.038
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 33 0.16
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 32 0.27
At4g03620.1 68417.m00497 myosin heavy chain-related contains wea... 32 0.36
At4g02640.2 68417.m00359 bZIP transcription factor family protei... 32 0.36
At4g02640.1 68417.m00358 bZIP transcription factor family protei... 32 0.36
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 32 0.36
At1g56660.1 68414.m06516 expressed protein 32 0.36
At5g66540.1 68418.m08389 expressed protein ; supported by full-L... 31 0.83
At5g57830.1 68418.m07232 expressed protein contains Pfam profile... 31 0.83
At3g26050.1 68416.m03244 expressed protein 30 1.1
At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 30 1.1
At1g77580.2 68414.m09032 myosin heavy chain-related low similari... 30 1.1
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 30 1.4
At1g80070.1 68414.m09373 splicing factor, putative strong simila... 30 1.4
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 30 1.4
At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearl... 29 1.9
At5g56010.1 68418.m06989 heat shock protein, putative strong sim... 29 1.9
At5g54410.1 68418.m06777 hypothetical protein 29 1.9
At4g19550.1 68417.m02875 expressed protein 29 1.9
At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 29 1.9
At3g05830.1 68416.m00654 expressed protein 29 1.9
At3g05110.1 68416.m00555 hypothetical protein 29 1.9
At1g18890.1 68414.m02351 calcium-dependent protein kinase 1 (CDP... 29 1.9
At5g63640.1 68418.m07990 VHS domain-containing protein / GAT dom... 29 2.5
At5g61150.2 68418.m07672 leo1-like family protein weak similarit... 29 2.5
At5g61150.1 68418.m07671 leo1-like family protein weak similarit... 29 2.5
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 29 2.5
At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearl... 29 2.5
At5g19310.1 68418.m02301 homeotic gene regulator, putative simil... 29 2.5
At4g38780.1 68417.m05491 splicing factor, putative strong simila... 29 2.5
At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly id... 29 3.3
At5g48610.1 68418.m06012 expressed protein ; expression supporte... 29 3.3
At2g22795.1 68415.m02704 expressed protein 29 3.3
At1g47900.1 68414.m05334 expressed protein 29 3.3
At5g52550.1 68418.m06525 expressed protein 28 4.4
At1g27720.1 68414.m03388 transcription initiation factor IID (TF... 28 4.4
At2g46900.1 68415.m05857 expressed protein contains Pfam profile... 28 5.8
At2g41170.1 68415.m05085 F-box family protein contains Pfam PF00... 28 5.8
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 28 5.8
At1g64320.1 68414.m07289 myosin heavy chain-related similar to m... 28 5.8
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 28 5.8
At1g28450.1 68414.m03497 MADS-box family protein similar to MADS... 28 5.8
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 27 7.7
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 27 7.7
At4g26630.1 68417.m03837 expressed protein 27 7.7
At4g15730.1 68417.m02394 expressed protein 27 7.7
At2g31410.1 68415.m03838 expressed protein 27 7.7
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +1
Query: 16 KDYHERIARLE-DEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAK 192
K H ++ + E D+K E K + EI SQ N++ K K + + K E + +
Sbjct: 1140 KSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKE 1199
Query: 193 LQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQK 324
++K + N + +KK+ ++EE K+K+ K KP D K
Sbjct: 1200 SEEKKLKKNEED-----RKKQTSVEENKKQKETKKEKNKPKDDK 1238
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +1
Query: 145 KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQK 324
K T+ SK + K K +KK ++ N + K KKE+ E K++ K + K
Sbjct: 930 KDTINTSSKQKGKDKKKKKKESK-NSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSK 988
Query: 325 VKEE 336
+KEE
Sbjct: 989 LKEE 992
Score = 28.3 bits (60), Expect = 4.4
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Frame = +1
Query: 16 KDY-HERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAK 192
K+Y + + + ED K + K E + N + + K KK +YE K +K
Sbjct: 964 KEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKK--EYEEKKSK 1021
Query: 193 LQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEVE 345
+++A + ++Q KK+E E++ +E+K K + D K K++E E
Sbjct: 1022 TKEEAKKEKKKSQ---DKKRE---EKDSEERKSKKEKEESRDLKAKKKEEE 1066
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 36.7 bits (81), Expect = 0.013
Identities = 22/90 (24%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +1
Query: 28 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 207
+++A L+ ++ +LE +++K EIS+ SQ+ +L+ + + KV +E+ ++ +
Sbjct: 879 QQVASLDSQRAELEIQLEKKSEEISEYLSQITNLKEEII----NKVKVHESILEEINGLS 934
Query: 208 AEFNFRN-QLKVVKKKEFTLEEEDKEKKPD 294
+ R +L+ + K+ L+EE + KK +
Sbjct: 935 EKIKGRELELETLGKQRSELDEELRTKKEE 964
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 35.1 bits (77), Expect = 0.038
Identities = 24/95 (25%), Positives = 51/95 (53%)
Frame = +1
Query: 49 DEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRN 228
DEK + K+KD + NS+ ++ + K K K+ ++ + + +KK ++N +
Sbjct: 158 DEKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYKEHHD-DDDYDEKKKKKKDYNDDD 216
Query: 229 QLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKE 333
+ K KKK + ++++K+KK +++ +K KE
Sbjct: 217 EKK--KKKHYNDDDDEKKKKHNYNDDDDEKKKKKE 249
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1
Query: 247 KKEFTLEEEDKEKKPDWSKGKPGDQKVKEEE 339
++E EEEDK+KK + K K D+K KEEE
Sbjct: 183 EEEKKKEEEDKKKKEEEDKKKKEDEKKKEEE 213
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/73 (26%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 139 FVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKE-KKPDWSKGKPG 315
++K + K ++ + + +KK E + + + + KKK+ +++++E KK + +K K G
Sbjct: 166 YIKKKVHKHAEIISSKTEEEKKKEEEDKKKKEEEDKKKKEDEKKKEEEKKKEEENKKKEG 225
Query: 316 DQKVKEEEVEA*T 354
++K +E +VE T
Sbjct: 226 EKKKEEVKVEVTT 238
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 32.3 bits (70), Expect = 0.27
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +1
Query: 34 IARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 213
I +ED+ LEY VK ++ I L+ ++ D K LK+ +KF++ QK
Sbjct: 254 IDEIEDKSKKLEYQVKEQEDIIQRLSMEIKD-----QKKLLKEQKDAIDKFSEDQKLMKR 308
Query: 214 FNFRNQL--KVVKKKEFTLEEEDKEKKPD 294
++F ++L +++KK L E+ + K D
Sbjct: 309 WSFGSKLNTNLLEKKMEELAEDFRMKMED 337
>At4g03620.1 68417.m00497 myosin heavy chain-related contains weak
similarity to Swiss-Prot:P24733 myosin heavy chain,
striated muscle [Aequipecten irradians]
Length = 342
Score = 31.9 bits (69), Expect = 0.36
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = +1
Query: 160 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKV 327
++S+ ++ ++++ ++F +N+ K++KK + E +KEKK D PGD V
Sbjct: 193 ELSRKAHELNEMEELVSDFRAQNE-KLLKKVQNCAVEHNKEKKEDIDGPGPGDNNV 247
>At4g02640.2 68417.m00359 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 417
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 79 KRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKF 186
+RK + SDL +QVNDL+G+ LK++S +K+
Sbjct: 240 RRKQEQTSDLETQVNDLKGEH-SSLLKQLSNMNHKY 274
>At4g02640.1 68417.m00358 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 411
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 79 KRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKF 186
+RK + SDL +QVNDL+G+ LK++S +K+
Sbjct: 234 RRKQEQTSDLETQVNDLKGEH-SSLLKQLSNMNHKY 268
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 31.9 bits (69), Expect = 0.36
Identities = 25/107 (23%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +1
Query: 28 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 207
ER R E E+ E + KR++ E Q + K ++ K E + AK++++
Sbjct: 592 ERKIREEQERKREEEMAKRREQE-----RQKKEREEMERKKREEEARKREEEMAKIREEE 646
Query: 208 AEFNFRNQLKVVKKKEFTLE-EEDKEKKPDWSKGKPGDQKVKEEEVE 345
+ R ++ +++E + EE+++++ + +K +++ KEEE E
Sbjct: 647 RQRKEREDVERKRREEEAMRREEERKREEEAAKRAEEERRKKEEEEE 693
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 31.9 bits (69), Expect = 0.36
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 145 KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQK 324
K L++ +NK + + E + K K+KE + EDK+ K KG+ GD +
Sbjct: 166 KEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLE 225
Query: 325 VKEEE 339
++EE
Sbjct: 226 KEDEE 230
Score = 31.5 bits (68), Expect = 0.47
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Frame = +1
Query: 79 KRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAK--LQKKAAEFNFRNQLKVVK-K 249
++K ++S ++ + GK K K S E K K +KK E + N+ K VK K
Sbjct: 156 EKKHEDVSQEKEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGK 215
Query: 250 KEF----TLEEEDKEKKPDWSKGKPGDQKVKEEE 339
KE LE+ED+EKK + + DQ++KE++
Sbjct: 216 KEKGEKGDLEKEDEEKKKEHDE---TDQEMKEKD 246
Score = 29.1 bits (62), Expect = 2.5
Identities = 23/87 (26%), Positives = 42/87 (48%)
Frame = +1
Query: 79 KRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEF 258
K+K+ S+ + +V + K K L+K E K + + E ++ K KK++
Sbjct: 199 KQKEESKSNEDKKVKGKKEKGEKGDLEKED--EEKKKEHDETDQEMKEKDSKKNKKKEKD 256
Query: 259 TLEEEDKEKKPDWSKGKPGDQKVKEEE 339
E+K+KKPD K + + KE++
Sbjct: 257 ESCAEEKKKKPDKEKKEKDESTEKEDK 283
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +1
Query: 154 LKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKE 333
+K+ +NK + + AE + K K+K+ + E+EDK+ K KGK G++ KE
Sbjct: 242 MKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEKEDKKLK--GKKGK-GEKPEKE 298
Query: 334 EE 339
+E
Sbjct: 299 DE 300
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 157 KKVSKYEN-KFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKE 333
KK SK E + + +KK + +N+ K K+ + T E+++EKK D K K KE
Sbjct: 414 KKKSKVEGGESEEGKKKKKKDKKKNKKKDTKEPKMT--EDEEEKKDDSKDVKIEGSKAKE 471
Query: 334 EE 339
E+
Sbjct: 472 EK 473
Score = 27.5 bits (58), Expect = 7.7
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 91 MEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFT-LE 267
M + N++ L K L K EN +++ KA ++K K +E +
Sbjct: 1 MSSNQENAKEEKLHVKIKTQELDPKEKGENVEVEMEVKAKSIE---KVKAKKDEESSGKS 57
Query: 268 EEDKEKKPDWSKGKPGDQKVKEEE 339
++DKEKK KGK D +VKE++
Sbjct: 58 KKDKEKK----KGKNVDSEVKEDK 77
>At5g66540.1 68418.m08389 expressed protein ; supported by
full-Length cDNA gi:12057175 from [Arabidopsis thaliana]
Length = 524
Score = 30.7 bits (66), Expect = 0.83
Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Frame = +1
Query: 40 RLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFN 219
+L + FD E I ++ DM+ L + LR + +K+ +K + KL K A + +
Sbjct: 55 QLSSDGFDAEQIWQQIDMQSQPL---LTSLRQE-----VKRFAKNPEEIRKLGKLALKVS 106
Query: 220 FRNQLKVVKKKEFT---LEEEDKEKKPDWSKGKPGDQKVKEEEVE 345
+ + + F +++EDKE + + S+G+ +++ ++EE E
Sbjct: 107 HEDDIDEMDMDGFDSDDVDDEDKEIESNDSEGEDEEEEEEDEEEE 151
>At5g57830.1 68418.m07232 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 387
Score = 30.7 bits (66), Expect = 0.83
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +1
Query: 28 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 207
E++ E E ++ +K+MEI+ L QV R K + + ENKF + +
Sbjct: 78 EKMCHAETSLVLFEDLIYQKEMEIASLEFQVQAYRCKLLSLGCSDPAVIENKFPETLIFS 137
Query: 208 AEFNFRNQLKVVKK 249
E + NQ + +K+
Sbjct: 138 GENSRGNQKRKMKR 151
>At3g26050.1 68416.m03244 expressed protein
Length = 533
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 79 KRKDMEI-SDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKE 255
KRK++ + S ++ ++++ + + +S + AK ++ F FR+ + K+KE
Sbjct: 355 KRKNISVRSSVSCRISNNEQRKPSVGCENLSTHSRTKAKSLTVSSPFVFRSDERAEKRKE 414
Query: 256 FTLEEEDKEKK 288
F + E+K KK
Sbjct: 415 FFKKVEEKNKK 425
>At3g04960.1 68416.m00538 expressed protein low similarity to
SP|P32380 NUF1 protein (Spindle poly body spacer protein
SPC110) {Saccharomyces cerevisiae}
Length = 556
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +1
Query: 61 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE--FNFRNQL 234
DLE + +RK+ E+ ++ + D ++ +LK + +++F L+++A E + RNQ+
Sbjct: 6 DLEGLDQRKE-EMRNIFDDIQDKASLILQFSLKW-EEIDDRFGFLKQRAMEKEVSVRNQI 63
Query: 235 KVVKKKEFTLE-EEDKEKK 288
++KKE L E++E+K
Sbjct: 64 LELEKKEERLRLVEERERK 82
>At1g77580.2 68414.m09032 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 779
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +1
Query: 76 VKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNF-RNQLKVVKKK 252
++ K EI VN+L+ + T+ + + K AK++ + R +++K
Sbjct: 568 IETKLGEIQTEMKLVNELKAEVESQTIAMEADAKTKSAKIESLEEDMRKERFAFDELRRK 627
Query: 253 EFTLEEEDKEKKPDWSKGKPGDQKVKEEEVE 345
LEEE K + K + + K+K+E++E
Sbjct: 628 CEALEEEISLHKENSIKSENKEPKIKQEDIE 658
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 29.9 bits (64), Expect = 1.4
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Frame = +1
Query: 10 VCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKF--------VKPTLKKV 165
V + E++ + ED+ + +K +D ++ + + D++ K V K+V
Sbjct: 266 VVAELEEKLIKNEDDIEEKTEEMKEQDNNQANKSEEEEDVKKKIDENETPEKVDTESKEV 325
Query: 166 SKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGK-PGD---QKVKE 333
E + +++ E + K+KE E++ KEK + K K GD +KVKE
Sbjct: 326 ESVEETTQEKEEEVKEEGKERVEEEEKEKEKVKEDDQKEKVEEEEKEKVKGDEEKEKVKE 385
Query: 334 EE 339
EE
Sbjct: 386 EE 387
>At1g80070.1 68414.m09373 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2382
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/84 (21%), Positives = 39/84 (46%)
Frame = +1
Query: 61 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 240
DL Y K+ D+ ++ S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1386 DLRYS-KQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1444
Query: 241 VKKKEFTLEEEDKEKKPDWSKGKP 312
+ + TLE + + W +G P
Sbjct: 1445 AQNRRLTLE----DLEDSWDRGIP 1464
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +1
Query: 34 IARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT---LKKVSKYENKFAKLQKK 204
++ L K L ++++KD EIS+ NS + K VK T +K ++ A+L +
Sbjct: 117 MSELHKSKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARS 176
Query: 205 AAEFNFRNQLKVVKKKEFTLEEEDKEKKPD 294
A + +Q K + ++ +E+ K D
Sbjct: 177 QAMCSRLSQEKELTERHAKWLDEELTAKVD 206
>At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearly
identical to SP|P55737 Heat shock protein 81-2 (HSP81-2)
{Arabidopsis thaliana}
Length = 699
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +1
Query: 175 ENKFAKLQKKAAEF-NFRNQLKVVK--KKEFTLEEEDKEKKPDWSKGKPGDQKVKEEE 339
E + L KK +EF ++ L + K +KE + +EE++EKK + K + D++ ++EE
Sbjct: 188 ERRLKDLVKKHSEFISYPISLWIEKTIEKEISDDEEEEEKKDEEGKVEEVDEEKEKEE 245
>At5g56010.1 68418.m06989 heat shock protein, putative strong
similarity to SP|P55737 Heat shock protein 81-2
(HSP81-2) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 699
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +1
Query: 175 ENKFAKLQKKAAEF-NFRNQLKVVK--KKEFTLEEEDKEKKPDWSKGKPGDQKVKEEE 339
E + L KK +EF ++ L + K +KE + +EE++EKK + K + D++ ++EE
Sbjct: 188 ERRLKDLVKKHSEFISYPISLWIEKTIEKEISDDEEEEEKKDEEGKVEEVDEEKEKEE 245
>At5g54410.1 68418.m06777 hypothetical protein
Length = 219
Score = 29.5 bits (63), Expect = 1.9
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 2/112 (1%)
Frame = +1
Query: 16 KDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT--LKKVSKYENKFA 189
K E + +E D +RK E L ++ K K L +K ENK
Sbjct: 40 KKLREETLQSNEEANDAMETFRRKTNEQKRLENEKRKQALKDAKDLKDLTYKTKVENKLK 99
Query: 190 KLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEVE 345
K Q + + +KK+ EEE+K+ + K +P ++K K+ E
Sbjct: 100 KTQPEKDRAEEEEKDLTEEKKKDPTEEEEKDPTEE-KKKEPAEEKKKDPTEE 150
>At4g19550.1 68417.m02875 expressed protein
Length = 212
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = +1
Query: 154 LKKVSKYEN--KFAKLQKKAA-----EFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKP 312
L K+ EN K AKL K E++ +N + + K +++ EEE++ ++PDW++
Sbjct: 119 LDKLFDPENSPKRAKLDKPVVVGDQIEYSKQNSEESLLKSQYSEEEEEEAEEPDWNEDYS 178
Query: 313 GDQKVKEEE 339
+ + E
Sbjct: 179 NEDAYRGNE 187
>At3g15920.1 68416.m02013 phox (PX) domain-containing protein weak
similarity to myosin heavy chain [Rana catesbeiana]
GI:4249699; contains Pfam profile PF00787: PX domain
Length = 755
Score = 29.5 bits (63), Expect = 1.9
Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Frame = +1
Query: 1 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK-----PTLKKV 165
+++ C + + ++DEK +E + E L Q+ND+R F L+
Sbjct: 501 LRKQCMEMESFLNSIKDEKTHIETANESLVQENQMLLQQINDIRENFENFHKEHEELEVK 560
Query: 166 SKYENKFAKLQKKA---AEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKEE 336
+K E K + K+ + + R +L + K++ +E + +K K D+K+ E
Sbjct: 561 AKAELKVLVKEVKSLRTTQSDLRQELSGIMKEKLEMERIVQREKDREETAKNADKKLLHE 620
>At3g05830.1 68416.m00654 expressed protein
Length = 336
Score = 29.5 bits (63), Expect = 1.9
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +1
Query: 55 KFD-LEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQ 231
KF+ + +V+ KD EI+ L ++ + G++ K + E++ K ++ +
Sbjct: 208 KFERMNRLVEVKDEEITKLKDEIRLMSGQWKH----KTKELESQLEKQRRTDQDLK---- 259
Query: 232 LKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKE 333
K V K EF L+E + + KG+ D ++KE
Sbjct: 260 -KKVLKLEFCLQEARSQTRKLQRKGERRDMEIKE 292
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/76 (22%), Positives = 37/76 (48%)
Frame = +1
Query: 61 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 240
DLE I K E S+ + ++ +LK++ EN+ +++ K F+ + +
Sbjct: 35 DLEQIQKEDSSEEICTESERMRKETELIETSLKQLEARENELREVEAKRKFFDLKEKELE 94
Query: 241 VKKKEFTLEEEDKEKK 288
K+KE L++ +++
Sbjct: 95 EKEKELELKQRQVQER 110
>At1g18890.1 68414.m02351 calcium-dependent protein kinase 1 (CDPK1)
identical to calcium-dependent protein kinase
[Arabidopsis thaliana] gi|604880|dbj|BAA04829; contains
protein kinase domain, Pfam:PF00069; contains EF hand
domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 545
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 133 GKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKP 312
G V+ LK+ S K+ + AE +++V+K F+L ++DK+ K + + K
Sbjct: 333 GDIVRSRLKQFSMMNRFKKKVLRVIAEHLSIQEVEVIKNM-FSLMDDDKDGKITYPELKA 391
Query: 313 GDQKV 327
G QKV
Sbjct: 392 GLQKV 396
>At5g63640.1 68418.m07990 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 447
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 154 LKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPD--WSKGKPGDQKV 327
L+ V N K + KA+ N + + + LEEED+E++P+ + + + G +
Sbjct: 285 LEPVRPISNGDQKRELKASNANTESSSFISNRAHLKLEEEDEEEEPEQLFRRLRKGKARA 344
Query: 328 KEEEVE 345
+ E+ E
Sbjct: 345 RPEDEE 350
>At5g61150.2 68418.m07672 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 623
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 244 KKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEVE 345
++ E+ EEE++EK P +GK + + +E+ E
Sbjct: 525 EESEYETEEEEEEKSPARGRGKDSEDEYEEDAEE 558
>At5g61150.1 68418.m07671 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 625
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 244 KKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEVE 345
++ E+ EEE++EK P +GK + + +E+ E
Sbjct: 525 EESEYETEEEEEEKSPARGRGKDSEDEYEEDAEE 558
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +1
Query: 145 KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQK 324
K +K +K + + K K+ E + + + KK + E++DKE+K K K K
Sbjct: 65 KKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKEKERKAK 124
Query: 325 VKEEEVEA 348
K+++ E+
Sbjct: 125 EKKDKEES 132
>At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearly
identical to heat shock protein hsp81.4 [Arabidopsis
thaliana] GI:1906828; contains Pfam profiles PF02518:
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like
domain protein, PF00183: Hsp90 protein
Length = 699
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +1
Query: 175 ENKFAKLQKKAAEF-NFRNQLKVVK--KKEFTLEEEDKEKKPDWSKGKPGDQKVKEEE 339
E + L KK +EF ++ L + K +KE + +EE++EKK + K + D++ ++EE
Sbjct: 188 ERRLKDLVKKHSEFISYPISLWIEKTIEKEISDDEEEEEKKDEEGKVEEIDEEKEKEE 245
>At5g19310.1 68418.m02301 homeotic gene regulator, putative similar to
SP|P25439 Homeotic gene regulator (Brahma protein)
{Drosophila melanogaster}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1064
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 154 LKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKE 333
+K + + +K+ +K + + ++ K E L E D+EK+ + + K K E
Sbjct: 964 MKAMESEDEDASKVSQKRKRTDTKTRMSNGSKAEAVLSESDEEKEEEEEERKEESGKESE 1023
Query: 334 EEVE 345
EE E
Sbjct: 1024 EENE 1027
>At4g38780.1 68417.m05491 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2332
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/84 (21%), Positives = 38/84 (45%)
Frame = +1
Query: 61 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 240
DL Y + D+ +S S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1338 DLRYS-NQTDVGVSHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1396
Query: 241 VKKKEFTLEEEDKEKKPDWSKGKP 312
+ + TLE + + W +G P
Sbjct: 1397 AQNRRLTLE----DLEDSWDRGIP 1416
>At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly
identical to RNA helicase [Arabidopsis thaliana]
GI:1488521; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 671
Score = 28.7 bits (61), Expect = 3.3
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +1
Query: 148 PTLKKVSKYENKFAKLQKKAA----EFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPG 315
P+L K E K K++KK A E + + K K K +EE+ EKK K K
Sbjct: 2 PSLMLSDKKEEK--KMKKKMALDTPELDSKKGKKEQKLKLSDSDEEESEKKKSKKKDKKR 59
Query: 316 DQKVKEEEVEA*TS 357
+E+EV++ +S
Sbjct: 60 KASEEEDEVKSDSS 73
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 160 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVK--E 333
K K E K KL E + + + K KK EEED+ K S+ K +KVK
Sbjct: 29 KKGKKEQKL-KLSDSDEEESEKKKSKKKDKKRKASEEEDEVKSDSSSEKKKSSKKVKLGV 87
Query: 334 EEVE 345
E+VE
Sbjct: 88 EDVE 91
>At5g48610.1 68418.m06012 expressed protein ; expression supported
by MPSS
Length = 470
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +1
Query: 157 KKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKE 333
KK K + K +KK+ + + Q + +KK+ +++DKEK + KGKP ++K E
Sbjct: 18 KKHKKDKEKREGKEKKSKDRSKDKQKERKEKKDKHKDQKDKEKGKE--KGKPLEEKKAE 74
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 214 FNFRNQLKVVKKKEFTLEEEDKEKK-PDWSKGKPGDQKVKEEE 339
F F+++ K K K+ + E KEKK D SK K ++K K+++
Sbjct: 9 FEFQDKYKEKKHKKDKEKREGKEKKSKDRSKDKQKERKEKKDK 51
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 28.7 bits (61), Expect = 3.3
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Frame = +1
Query: 4 KRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK 183
+++ + E EDE + E ++ E + ++ N+ + K+ K E +
Sbjct: 491 EKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKE 550
Query: 184 FAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEK---KPDWSKGKPGDQKVKEEEVE 345
A Q+++ E N+ + +K+E + +EE KEK K + + P ++ KE+E E
Sbjct: 551 EASSQEESKE----NETETKEKEESSSQEETKEKENEKIEKEESAP-QEETKEKENE 602
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Frame = +1
Query: 16 KDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYEN-KFAK 192
KD E ++ E + + E I K + + + + K + ++ + EN K K
Sbjct: 528 KDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEK 587
Query: 193 LQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEV 342
+ E + + ++K+E +EE KEK+ + + + +E V
Sbjct: 588 EESAPQEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENV 637
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 28.7 bits (61), Expect = 3.3
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 16 KDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV--KPTLKKVSKY-ENKF 186
KD+ E+I +++ + E V++ + ++ DLN +++ + V + +K+ SK E+
Sbjct: 88 KDFEEQIDAYDEKVHEYEEQVQKLNEDVEDLNEKLSVANEEIVTKEALVKQHSKVAEDAV 147
Query: 187 AKLQKKAAE-FNFRNQLKVVKKKEFTLEE 270
+ +K AE +N L+ V + T E+
Sbjct: 148 SGWEKADAEALALKNTLESVTLSKLTAED 176
>At5g52550.1 68418.m06525 expressed protein
Length = 360
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +1
Query: 118 VNDLRGKFVKPTLKKVSKYENKFAKLQKK-AAEFNFRNQLKVVK--KKEFTLEEEDKEKK 288
V R K VK + + + E K +L+K A R +L+ K KKE LE D+E
Sbjct: 15 VRKARKKKVKGVVDPIKQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDS 74
Query: 289 PDWSKGK 309
D +K K
Sbjct: 75 ADAAKKK 81
>At1g27720.1 68414.m03388 transcription initiation factor IID
(TFIID) component TAF4 family protein contains Pfam
profile PF05236: Transcription initiation factor TFIID
component TAF4 family
Length = 682
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 193 LQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEVE 345
LQ+ AE RN+ + + E +++ K +W K G++K KE + E
Sbjct: 520 LQRTDAE-KCRNRTFITSDIRKEINEMNQKVKEEWEKKHSGEEKNKENDTE 569
>At2g46900.1 68415.m05857 expressed protein contains Pfam profile
PF04910: Protein of unknown function, DUF654
Length = 627
Score = 27.9 bits (59), Expect = 5.8
Identities = 23/93 (24%), Positives = 40/93 (43%)
Frame = +1
Query: 46 EDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFR 225
+ E+ D E I ++K+ E +D S V D K KK K +NK + AE
Sbjct: 51 DPEEIDDETIAEKKN-EDADHQSSVADHVQPVSKNKSKKKKKKKNKESGSNVPKAEMTLD 109
Query: 226 NQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQK 324
L+ + + +++ +E KP+ K +
Sbjct: 110 ETLEALGLNANSKQDKVQETKPNADSSKKASSR 142
>At2g41170.1 68415.m05085 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/100 (20%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +1
Query: 4 KRVCKDYHERIARLEDEKFDLEYIVKR-KDMEISDLNSQVNDLRGKFVKPTLKKVSKYEN 180
K+ ++ +++ L+ L+ I+++ E+ + S ++LR K V L + E
Sbjct: 47 KKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWE-KHMET 105
Query: 181 KFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWS 300
K+ +L AA +++ + + + + ++ KP+WS
Sbjct: 106 KWGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWS 145
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 76 VKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 213
+K ++SDL+ Q+N+++GK T K+ + E K L+K AE
Sbjct: 729 LKNMQSQLSDLSHQINEVKGK--ASTYKQ--RLEKKCCDLKKAEAE 770
>At1g64320.1 68414.m07289 myosin heavy chain-related similar to
myosin heavy chain (GI:4249703) [Rana catesbeiana];
similar to smooth muscle myosin heavy chain SM2
(GI:2352945) [Homo sapiens]
Length = 476
Score = 27.9 bits (59), Expect = 5.8
Identities = 22/123 (17%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Frame = +1
Query: 1 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYEN 180
+K ++ R++ D+ ++ R+ E+ L+ ++ ++ KK+ +
Sbjct: 136 LKEETEEERNRLSEEIDQLKGENQMLHRRISELDSLHMEMKTKSAHEMEDASKKLDTEVS 195
Query: 181 KFAKLQKKAAEF------NFRNQLKVVKKKEFTLEE--EDKEKKPDWSKGKPGDQKVKEE 336
KL K+ + ++Q +++K+++ T+++ ED+++ WS G D K+
Sbjct: 196 DQKKLVKEQDDIIRRLSAKIKDQQRLLKEQKDTIDKFAEDQKQSKRWSFGSSRDLKLNPN 255
Query: 337 EVE 345
+E
Sbjct: 256 ALE 258
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +1
Query: 151 TLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVK 330
T + + KY K + KKA E +Q + E E+DK + D GK G+ K+K
Sbjct: 282 TKEYLLKYVEKKIETAKKAKE----SQGTKENQAEGPESEQDKLESADNETGKDGESKIK 337
Query: 331 E 333
E
Sbjct: 338 E 338
>At1g28450.1 68414.m03497 MADS-box family protein similar to
MADS-box protein GI:2160701 from [Pinus radiata]
Length = 185
Score = 27.9 bits (59), Expect = 5.8
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +1
Query: 151 TLKKVSKYENKFAKLQKKAAEFN-FRNQLKV--VK-KKEFTLEEEDKEKKPDWSKGKPGD 318
+L++ K +K AK+Q+ +N +LKV VK KK L E K W K P D
Sbjct: 87 SLQRSVKNAHKQAKIQELCKRYNRLVEELKVDEVKVKKAAALAETRAVNKDAWWKADPND 146
Query: 319 QKVKEE 336
K E+
Sbjct: 147 VKDHEK 152
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 73 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQKKAAEFNFRNQLKVVKK 249
I+ KD E+ ++N L+ +F S Y+ + A LQKK E + +K
Sbjct: 409 ILSTKDAELKGAREEINRLQSEF--------SSYKIRAHALLQKKDMELAAAKDSEQIKS 460
Query: 250 KEFTLEEEDKE 282
E L+E +KE
Sbjct: 461 LEEALKEAEKE 471
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 73 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQKKAAEFNFRNQLKVVKK 249
I+ KD E+ ++N L+ +F S Y+ + A LQKK E + +K
Sbjct: 409 ILSTKDAELKGAREEINRLQSEF--------SSYKIRAHALLQKKDMELAAAKDSEQIKS 460
Query: 250 KEFTLEEEDKE 282
E L+E +KE
Sbjct: 461 LEEALKEAEKE 471
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 166 SKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEVE 345
S + AK QKK+ E KVVKK ++E +E+K + K + + KEE+ E
Sbjct: 492 SSSSKRSAKSQKKSEEAT-----KVVKKSLAHSDDESEEEKEEEEKQEEEKAEEKEEKKE 546
>At4g15730.1 68417.m02394 expressed protein
Length = 1059
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 229 QLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEV 342
Q+KV KKKE EE D K G + +K EE+
Sbjct: 585 QIKVKKKKEADKEESDGSKHIKTGDGNKLARVIKAEEI 622
>At2g31410.1 68415.m03838 expressed protein
Length = 199
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 72 HR*KERY-GDLRPELPSQRPQRQIRQAHTKEGFQIRKQIRQAPEEGRRIQLP*PIEGREK 248
HR R+ + +P+L + QR+I++A+ + +++++IR E R+ + E R+K
Sbjct: 92 HRSSGRFVKNRKPDLEEMKRQREIKKAYKERVNELKEEIRSNKVEKRKKKE--EREKRKK 149
Query: 249 EGIHLGRGRQREK 287
E + L G + +K
Sbjct: 150 ENV-LRTGTKLQK 161
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,006,983
Number of Sequences: 28952
Number of extensions: 229239
Number of successful extensions: 972
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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