Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30589
         (753 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    24   1.8  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    24   1.8  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   5.4  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   7.1  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   9.4  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   9.4  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +3

Query: 150 VLRDGVILCKLANKLAPGSVKKIQERGTNFQLMENIQRFQAAIKKYGVPEE 302
           + R+ V+L  L   L   SV  IQ+ GT F     ++RF      Y  P+E
Sbjct: 1   MFREFVLLASLLY-LGNESVHGIQKWGTQFGQAPLLERFFWRTLDYAYPDE 50


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 610 TDINVENIGKNLEAIYMWRVL 548
           TDI+  N+  +L+ IY W+ +
Sbjct: 18  TDIHSRNLTNSLKVIYEWKYI 38


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 460 KNNFGPTTLNLTSKWASIRAPPSPVMVA 543
           + NF      L  +W +   P SP++VA
Sbjct: 430 EENFKDAKKYLPERWTTPTTPHSPLLVA 457


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 3   RWKPALETSLETRFRLHTMPARNKDQEQE 89
           RW   +   +  RF L   P +++D+E+E
Sbjct: 335 RWVRVVFIQVLPRFLLIERPKKDEDEEEE 363


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 430 WLIRTNVPSRKNNFGPTTLNLTSKWASIRAPPSPV 534
           WL ++ VP+R +    T L + ++ + I A   PV
Sbjct: 264 WLDQSAVPARVSLGVTTLLTMATQTSGINASLPPV 298


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 430 WLIRTNVPSRKNNFGPTTLNLTSKWASIRAPPSPV 534
           WL ++ VP+R +    T L + ++ + I A   PV
Sbjct: 264 WLDQSAVPARVSLGVTTLLTMATQTSGINASLPPV 298


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,929
Number of Sequences: 438
Number of extensions: 5785
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)