Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30588
(694 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 40 0.002
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 37 0.015
At3g29075.1 68416.m03637 glycine-rich protein 36 0.025
At4g02640.2 68417.m00359 bZIP transcription factor family protei... 34 0.10
At4g02640.1 68417.m00358 bZIP transcription factor family protei... 34 0.10
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 33 0.18
At4g03620.1 68417.m00497 myosin heavy chain-related contains wea... 32 0.41
At4g01780.1 68417.m00233 XH/XS domain-containing protein contain... 31 0.55
At1g56660.1 68414.m06516 expressed protein 31 0.73
At5g57830.1 68418.m07232 expressed protein contains Pfam profile... 31 0.96
At3g26050.1 68416.m03244 expressed protein 30 1.3
At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 30 1.3
At2g22795.1 68415.m02704 expressed protein 30 1.7
At1g80070.1 68414.m09373 splicing factor, putative strong simila... 30 1.7
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 30 1.7
At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibit... 29 2.2
At3g05110.1 68416.m00555 hypothetical protein 29 2.2
At1g18890.1 68414.m02351 calcium-dependent protein kinase 1 (CDP... 29 2.2
At5g54410.1 68418.m06777 hypothetical protein 29 2.9
At4g38780.1 68417.m05491 splicing factor, putative strong simila... 29 2.9
At4g19550.1 68417.m02875 expressed protein 29 2.9
At1g24160.1 68414.m03048 expressed protein Location of EST gb|H3... 29 2.9
At5g65180.2 68418.m08199 expressed protein contains Pfam domain,... 29 3.9
At5g65180.1 68418.m08198 expressed protein contains Pfam domain,... 29 3.9
At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 29 3.9
At1g47900.1 68414.m05334 expressed protein 29 3.9
At5g57970.1 68418.m07253 methyladenine glycosylase family protei... 28 5.1
At5g52550.1 68418.m06525 expressed protein 28 5.1
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 28 5.1
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 28 5.1
At5g63640.1 68418.m07990 VHS domain-containing protein / GAT dom... 28 6.8
At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly id... 28 6.8
At5g48610.1 68418.m06012 expressed protein ; expression supporte... 28 6.8
At2g46900.1 68415.m05857 expressed protein contains Pfam profile... 28 6.8
At2g41170.1 68415.m05085 F-box family protein contains Pfam PF00... 28 6.8
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 28 6.8
At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein ... 28 6.8
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 27 8.9
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 27 8.9
At5g65620.1 68418.m08255 peptidase M3 family protein / thimet ol... 27 8.9
At2g31410.1 68415.m03838 expressed protein 27 8.9
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Frame = +3
Query: 333 KNIDDANEDTIKRVCKDYHERIARLE-DEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK 509
+N + ED ++ K H ++ + E D+K E K + EI SQ N++ K K
Sbjct: 1126 QNSNKKKEDKNEKK-KSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKK 1184
Query: 510 PTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQK 686
+ + K E + + ++K + N + +KK+ ++EE K+K+ K KP D K
Sbjct: 1185 SSKDQQKKKEKEMKESEEKKLKKNEED-----RKKQTSVEENKKQKETKKEKNKPKDDK 1238
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 36.7 bits (81), Expect = 0.015
Identities = 22/90 (24%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +3
Query: 390 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 569
+++A L+ ++ +LE +++K EIS+ SQ+ +L+ + + KV +E+ ++ +
Sbjct: 879 QQVASLDSQRAELEIQLEKKSEEISEYLSQITNLKEEII----NKVKVHESILEEINGLS 934
Query: 570 AEFNFRN-QLKVVKKKEFTLEEEDKEKKPD 656
+ R +L+ + K+ L+EE + KK +
Sbjct: 935 EKIKGRELELETLGKQRSELDEELRTKKEE 964
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 35.9 bits (79), Expect = 0.025
Identities = 29/117 (24%), Positives = 59/117 (50%)
Frame = +3
Query: 342 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK 521
DD ++ K KDY + DEK + K+KD + NS+ ++ + K K K
Sbjct: 140 DDGDDGHKKHSGKDYDDG-----DEKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYK 194
Query: 522 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVK 692
+ ++ + + +KK ++N ++ K KKK + ++++K+KK +++ +K K
Sbjct: 195 EHHD-DDDYDEKKKKKKDYNDDDEKK--KKKHYNDDDDEKKKKHNYNDDDDEKKKKK 248
>At4g02640.2 68417.m00359 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 417
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +3
Query: 333 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 512
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 205 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 262
Query: 513 TLKKVSKYENKF 548
LK++S +K+
Sbjct: 263 LLKQLSNMNHKY 274
>At4g02640.1 68417.m00358 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 411
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +3
Query: 333 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 512
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 199 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 256
Query: 513 TLKKVSKYENKF 548
LK++S +K+
Sbjct: 257 LLKQLSNMNHKY 268
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 33.1 bits (72), Expect = 0.18
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Frame = +3
Query: 333 KNIDDANEDTIKRVCKDY--HERIA---RLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 497
K + NE+ ++ ++ H +IA +ED+ LEY VK ++ I L+ ++ D
Sbjct: 228 KKRKEFNEEMKSKITENQKLHTKIAVIDEIEDKSKKLEYQVKEQEDIIQRLSMEIKD--- 284
Query: 498 KFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQL--KVVKKKEFTLEEEDKEKKPD 656
K LK+ +KF++ QK ++F ++L +++KK L E+ + K D
Sbjct: 285 --QKKLLKEQKDAIDKFSEDQKLMKRWSFGSKLNTNLLEKKMEELAEDFRMKMED 337
>At4g03620.1 68417.m00497 myosin heavy chain-related contains weak
similarity to Swiss-Prot:P24733 myosin heavy chain,
striated muscle [Aequipecten irradians]
Length = 342
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = +3
Query: 522 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKV 689
++S+ ++ ++++ ++F +N+ K++KK + E +KEKK D PGD V
Sbjct: 193 ELSRKAHELNEMEELVSDFRAQNE-KLLKKVQNCAVEHNKEKKEDIDGPGPGDNNV 247
>At4g01780.1 68417.m00233 XH/XS domain-containing protein contains
Pfam profiles PF03469: XH domain, PF03468: XS domain
Length = 456
Score = 31.5 bits (68), Expect = 0.55
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Frame = +3
Query: 351 NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVS 530
+ED +R ++ HE+I RLE + ++ I ++E+ L Q+N ++ + V
Sbjct: 219 SEDLEQRQKEELHEKIIRLERQIDQVQAI----ELEVEQLKGQLNVMKHMASDGDAQVVK 274
Query: 531 KYENKFAKLQKKAAE---FNFRNQLKVVKKKEFTLEEEDKEKK 650
+ + F L +K AE N NQ +++++ E ++ K+
Sbjct: 275 EVDIIFKDLVEKEAELADLNKFNQTLILRERRTNDELQEARKE 317
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 31.1 bits (67), Expect = 0.73
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Frame = +3
Query: 327 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV 506
K + +++ E K+ K+ E +++K D E +K ++S ++ + GK
Sbjct: 122 KHEELEEEKEGKKKKNKKEKDESGPEEKNKKADKE----KKHEDVSQEKEELEEEDGKKN 177
Query: 507 KPTLKKVSKYENKFAK--LQKKAAEFNFRNQLKVVK-KKEF----TLEEEDKEKKPD 656
K K S E K K +KK E + N+ K VK KKE LE+ED+EKK +
Sbjct: 178 KKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLEKEDEEKKKE 234
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 507 KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGD 680
K L++ +NK + + E + K K+KE + EDK+ K KG+ GD
Sbjct: 166 KEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGD 223
>At5g57830.1 68418.m07232 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 387
Score = 30.7 bits (66), Expect = 0.96
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 390 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 569
E++ E E ++ +K+MEI+ L QV R K + + ENKF + +
Sbjct: 78 EKMCHAETSLVLFEDLIYQKEMEIASLEFQVQAYRCKLLSLGCSDPAVIENKFPETLIFS 137
Query: 570 AEFNFRNQLKVVKK 611
E + NQ + +K+
Sbjct: 138 GENSRGNQKRKMKR 151
>At3g26050.1 68416.m03244 expressed protein
Length = 533
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 441 KRKDMEI-SDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKE 617
KRK++ + S ++ ++++ + + +S + AK ++ F FR+ + K+KE
Sbjct: 355 KRKNISVRSSVSCRISNNEQRKPSVGCENLSTHSRTKAKSLTVSSPFVFRSDERAEKRKE 414
Query: 618 FTLEEEDKEKK 650
F + E+K KK
Sbjct: 415 FFKKVEEKNKK 425
>At3g04960.1 68416.m00538 expressed protein low similarity to
SP|P32380 NUF1 protein (Spindle poly body spacer protein
SPC110) {Saccharomyces cerevisiae}
Length = 556
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +3
Query: 423 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE--FNFRNQL 596
DLE + +RK+ E+ ++ + D ++ +LK + +++F L+++A E + RNQ+
Sbjct: 6 DLEGLDQRKE-EMRNIFDDIQDKASLILQFSLKW-EEIDDRFGFLKQRAMEKEVSVRNQI 63
Query: 597 KVVKKKEFTLE-EEDKEKK 650
++KKE L E++E+K
Sbjct: 64 LELEKKEERLRLVEERERK 82
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +3
Query: 345 DANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK 521
+ NED +++ + E EDE + E ++ E + ++ N+ + K
Sbjct: 483 EKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDK 542
Query: 522 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKK 650
+ K E + A Q+++ E N+ + +K+E + +EE KEK+
Sbjct: 543 ENEKIEKEEASSQEESKE----NETETKEKEESSSQEETKEKE 581
>At1g80070.1 68414.m09373 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2382
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/84 (21%), Positives = 39/84 (46%)
Frame = +3
Query: 423 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 602
DL Y K+ D+ ++ S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1386 DLRYS-KQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1444
Query: 603 VKKKEFTLEEEDKEKKPDWSKGKP 674
+ + TLE + + W +G P
Sbjct: 1445 AQNRRLTLE----DLEDSWDRGIP 1464
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +3
Query: 396 IARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT---LKKVSKYENKFAKLQKK 566
++ L K L ++++KD EIS+ NS + K VK T +K ++ A+L +
Sbjct: 117 MSELHKSKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARS 176
Query: 567 AAEFNFRNQLKVVKKKEFTLEEEDKEKKPD 656
A + +Q K + ++ +E+ K D
Sbjct: 177 QAMCSRLSQEKELTERHAKWLDEELTAKVD 206
>At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibitor
family protein low similarity to SP|P83326
Pectinesterase inhibitor (Pectin methylesterase
inhibitor) (PMEI) {Actinidia chinensis}, pistil-specific
gene sts15 [Solanum tuberosum] GI:1616628; contains Pfam
profile PF04043: Plant invertase/pectin methylesterase
inhibitor
Length = 145
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 327 KPKNIDDANEDTIKRVCKDYHERIARLED 413
K KN++ A EDT+ K+Y + +A+L+D
Sbjct: 53 KQKNLEPALEDTLDDCSKNYLDAVAQLDD 81
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/76 (22%), Positives = 37/76 (48%)
Frame = +3
Query: 423 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 602
DLE I K E S+ + ++ +LK++ EN+ +++ K F+ + +
Sbjct: 35 DLEQIQKEDSSEEICTESERMRKETELIETSLKQLEARENELREVEAKRKFFDLKEKELE 94
Query: 603 VKKKEFTLEEEDKEKK 650
K+KE L++ +++
Sbjct: 95 EKEKELELKQRQVQER 110
>At1g18890.1 68414.m02351 calcium-dependent protein kinase 1 (CDPK1)
identical to calcium-dependent protein kinase
[Arabidopsis thaliana] gi|604880|dbj|BAA04829; contains
protein kinase domain, Pfam:PF00069; contains EF hand
domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 545
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +3
Query: 495 GKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKP 674
G V+ LK+ S K+ + AE +++V+K F+L ++DK+ K + + K
Sbjct: 333 GDIVRSRLKQFSMMNRFKKKVLRVIAEHLSIQEVEVIKNM-FSLMDDDKDGKITYPELKA 391
Query: 675 GDQKV 689
G QKV
Sbjct: 392 GLQKV 396
>At5g54410.1 68418.m06777 hypothetical protein
Length = 219
Score = 29.1 bits (62), Expect = 2.9
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +3
Query: 339 IDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT- 515
I A + I K E + +E D +RK E L ++ K K
Sbjct: 27 IVQALAEAIDAANKKLREETLQSNEEANDAMETFRRKTNEQKRLENEKRKQALKDAKDLK 86
Query: 516 -LKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVK 692
L +K ENK K Q + + +KK+ EEE+K+ + K +P ++K K
Sbjct: 87 DLTYKTKVENKLKKTQPEKDRAEEEEKDLTEEKKKDPTEEEEKDPTEE-KKKEPAEEKKK 145
>At4g38780.1 68417.m05491 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2332
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/84 (21%), Positives = 38/84 (45%)
Frame = +3
Query: 423 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 602
DL Y + D+ +S S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1338 DLRYS-NQTDVGVSHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1396
Query: 603 VKKKEFTLEEEDKEKKPDWSKGKP 674
+ + TLE + + W +G P
Sbjct: 1397 AQNRRLTLE----DLEDSWDRGIP 1416
>At4g19550.1 68417.m02875 expressed protein
Length = 212
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Frame = +3
Query: 516 LKKVSKYEN--KFAKLQKKAA-----EFNFRNQLKVVKKKEFTLEEEDKEKKPDWSK 665
L K+ EN K AKL K E++ +N + + K +++ EEE++ ++PDW++
Sbjct: 119 LDKLFDPENSPKRAKLDKPVVVGDQIEYSKQNSEESLLKSQYSEEEEEEAEEPDWNE 175
>At1g24160.1 68414.m03048 expressed protein Location of EST
gb|H36355
Length = 540
Score = 29.1 bits (62), Expect = 2.9
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = +3
Query: 336 NIDDANEDTIKRVCKDYHERIARLEDE-KFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 512
+ID++NE+TI V K+ + ++DE K ++ V K EI+ ++ + V+
Sbjct: 159 SIDESNEETI--VVKECQSSVDTVKDEVKDSVDSPVLEKAEEIALEEEKIEMV--VHVQE 214
Query: 513 TLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKV 689
++V + + K ++ + Q V E T + KEKKP+ K G+ ++
Sbjct: 215 RSEEVLQEDEKEETEVREEVRDDISLQNDTVDANETTKKVVKKEKKPNLIKKNDGNVRI 273
>At5g65180.2 68418.m08199 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 311
Score = 28.7 bits (61), Expect = 3.9
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Frame = +3
Query: 342 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVK--RKDMEISDLNSQVNDLRGKFVKPT 515
+++NE+T CK RI ++E + D K RK+ +L + N LR K
Sbjct: 53 ENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEK-- 110
Query: 516 LKKVSKYENKFAK-----LQKKAAEF-NFRNQLKVVKKKEFTLEEEDKEKK 650
LK V + L+++ +E N ++Q++V +E T E ++ +K+
Sbjct: 111 LKSVEESRTSLVNHLREALREQESELENLQSQIQVA--QEQTEEAQNMQKR 159
>At5g65180.1 68418.m08198 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 439
Score = 28.7 bits (61), Expect = 3.9
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Frame = +3
Query: 342 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVK--RKDMEISDLNSQVNDLRGKFVKPT 515
+++NE+T CK RI ++E + D K RK+ +L + N LR K
Sbjct: 181 ENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEK-- 238
Query: 516 LKKVSKYENKFAK-----LQKKAAEF-NFRNQLKVVKKKEFTLEEEDKEKK 650
LK V + L+++ +E N ++Q++V +E T E ++ +K+
Sbjct: 239 LKSVEESRTSLVNHLREALREQESELENLQSQIQVA--QEQTEEAQNMQKR 287
>At3g15920.1 68416.m02013 phox (PX) domain-containing protein weak
similarity to myosin heavy chain [Rana catesbeiana]
GI:4249699; contains Pfam profile PF00787: PX domain
Length = 755
Score = 28.7 bits (61), Expect = 3.9
Identities = 25/119 (21%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Frame = +3
Query: 357 DTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK-----PTLK 521
+ +++ C + + ++DEK +E + E L Q+ND+R F L+
Sbjct: 499 EELRKQCMEMESFLNSIKDEKTHIETANESLVQENQMLLQQINDIRENFENFHKEHEELE 558
Query: 522 KVSKYENKFAKLQKKA---AEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKV 689
+K E K + K+ + + R +L + K++ +E + +K K D+K+
Sbjct: 559 VKAKAELKVLVKEVKSLRTTQSDLRQELSGIMKEKLEMERIVQREKDREETAKNADKKL 617
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +3
Query: 378 KDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV--KPTLKKVSKY-ENKF 548
KD+ E+I +++ + E V++ + ++ DLN +++ + V + +K+ SK E+
Sbjct: 88 KDFEEQIDAYDEKVHEYEEQVQKLNEDVEDLNEKLSVANEEIVTKEALVKQHSKVAEDAV 147
Query: 549 AKLQKKAAE-FNFRNQLKVVKKKEFTLEE 632
+ +K AE +N L+ V + T E+
Sbjct: 148 SGWEKADAEALALKNTLESVTLSKLTAED 176
>At5g57970.1 68418.m07253 methyladenine glycosylase family protein
similar to SP|P05100 DNA-3-methyladenine glycosylase I
(EC 3.2.2.20) (3-methyladenine-DNA glycosylase I,
constitutive) {Escherichia coli}; contains Pfam profile
PF03352: Methyladenine glycosylase
Length = 347
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +1
Query: 280 NVKLLKGGASSRRGAVNLRTLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSL 441
+++ L+ +S R G+ + TPT+ + K T+NA+ +L+ N++L
Sbjct: 40 SLRKLERSSSGRTGSDEKTSYATPTETVSSSSQKHTLNAASILRRHEQNLNSNL 93
>At5g52550.1 68418.m06525 expressed protein
Length = 360
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 480 VNDLRGKFVKPTLKKVSKYENKFAKLQKK-AAEFNFRNQLKVVK--KKEFTLEEEDKEKK 650
V R K VK + + + E K +L+K A R +L+ K KKE LE D+E
Sbjct: 15 VRKARKKKVKGVVDPIKQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDS 74
Query: 651 PDWSKGK 671
D +K K
Sbjct: 75 ADAAKKK 81
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 337 TLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSLKGKIW 456
TLT TK+ G ++ + AS + + + S+WNTS W
Sbjct: 577 TLTPITKLCFAGKSEFLVAASHIPRPELSVWNTSKLSLSW 616
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 28.3 bits (60), Expect = 5.1
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Frame = +3
Query: 333 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEY-IVKRKDMEISDLNSQVNDLRGKFVK 509
K + +D I+ H A+ + DL++ ++K K + I +++ L V+
Sbjct: 102 KKTTEIKKDVIRTTVLKVHIHCAQCDK---DLQHKLLKHKAIHIVKTDTKAQTLT---VQ 155
Query: 510 PTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKV 689
T++ K+ K A + + + + KKKE EEDK+KK + K K D+K
Sbjct: 156 GTIESAKLLAYIKKKVHKHAEIISSKTEEE--KKKE----EEDKKKKEEEDKKKKEDEKK 209
Query: 690 K 692
K
Sbjct: 210 K 210
>At5g63640.1 68418.m07990 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 447
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 516 LKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPD 656
L+ V N K + KA+ N + + + LEEED+E++P+
Sbjct: 285 LEPVRPISNGDQKRELKASNANTESSSFISNRAHLKLEEEDEEEEPE 331
>At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly
identical to RNA helicase [Arabidopsis thaliana]
GI:1488521; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 671
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +3
Query: 522 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVK 692
K K E K KL E + + + K KK EEED+ K S+ K +KVK
Sbjct: 29 KKGKKEQKL-KLSDSDEEESEKKKSKKKDKKRKASEEEDEVKSDSSSEKKKSSKKVK 84
>At5g48610.1 68418.m06012 expressed protein ; expression supported
by MPSS
Length = 470
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +3
Query: 519 KKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQK 686
KK K + K +KK+ + + Q + +KK+ +++DKEK + KGKP ++K
Sbjct: 18 KKHKKDKEKREGKEKKSKDRSKDKQKERKEKKDKHKDQKDKEKGKE--KGKPLEEK 71
>At2g46900.1 68415.m05857 expressed protein contains Pfam profile
PF04910: Protein of unknown function, DUF654
Length = 627
Score = 27.9 bits (59), Expect = 6.8
Identities = 23/93 (24%), Positives = 40/93 (43%)
Frame = +3
Query: 408 EDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFR 587
+ E+ D E I ++K+ E +D S V D K KK K +NK + AE
Sbjct: 51 DPEEIDDETIAEKKN-EDADHQSSVADHVQPVSKNKSKKKKKKKNKESGSNVPKAEMTLD 109
Query: 588 NQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQK 686
L+ + + +++ +E KP+ K +
Sbjct: 110 ETLEALGLNANSKQDKVQETKPNADSSKKASSR 142
>At2g41170.1 68415.m05085 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/100 (20%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +3
Query: 366 KRVCKDYHERIARLEDEKFDLEYIVKR-KDMEISDLNSQVNDLRGKFVKPTLKKVSKYEN 542
K+ ++ +++ L+ L+ I+++ E+ + S ++LR K V L + E
Sbjct: 47 KKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWE-KHMET 105
Query: 543 KFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWS 662
K+ +L AA +++ + + + + ++ KP+WS
Sbjct: 106 KWGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWS 145
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 438 VKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 575
+K ++SDL+ Q+N+++GK T K+ + E K L+K AE
Sbjct: 729 LKNMQSQLSDLSHQINEVKGK--ASTYKQ--RLEKKCCDLKKAEAE 770
>At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein
contains tubulin-tyrosine ligase family domain,
Pfam:PF03133
Length = 867
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 357 DTIKRVCKDYHERIARLEDEKFDLEYIV 440
+T ++C+ Y E A + KFDL Y+V
Sbjct: 674 ETGPKICQKYIEHPALFKGNKFDLRYVV 701
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 435 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQKKAAEFNFRNQLKVVKK 611
I+ KD E+ ++N L+ +F S Y+ + A LQKK E + +K
Sbjct: 409 ILSTKDAELKGAREEINRLQSEF--------SSYKIRAHALLQKKDMELAAAKDSEQIKS 460
Query: 612 KEFTLEEEDKE 644
E L+E +KE
Sbjct: 461 LEEALKEAEKE 471
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 435 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQKKAAEFNFRNQLKVVKK 611
I+ KD E+ ++N L+ +F S Y+ + A LQKK E + +K
Sbjct: 409 ILSTKDAELKGAREEINRLQSEF--------SSYKIRAHALLQKKDMELAAAKDSEQIKS 460
Query: 612 KEFTLEEEDKE 644
E L+E +KE
Sbjct: 461 LEEALKEAEKE 471
>At5g65620.1 68418.m08255 peptidase M3 family protein / thimet
oligopeptidase family protein similar to SP|P27237
Oligopeptidase A (EC 3.4.24.70) {Salmonella
typhimurium}; contains Pfam profile PF01432: Peptidase
family M3
Length = 791
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 669 CPSTSQAFSLCLPLPR*IPSFSRPSIGY 586
CP S +FS CLP PR S S S +
Sbjct: 42 CPIWSSSFSFCLPPPRSTTSTSLSSSSF 69
>At2g31410.1 68415.m03838 expressed protein
Length = 199
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +2
Query: 434 HR*KERY-GDLRPELPSQRPQRQIRQAHTKEGFQIRKQIRQAPEEGRRIQLP*PIEGREK 610
HR R+ + +P+L + QR+I++A+ + +++++IR E R+ + E R+K
Sbjct: 92 HRSSGRFVKNRKPDLEEMKRQREIKKAYKERVNELKEEIRSNKVEKRKKKE--EREKRKK 149
Query: 611 EGIHLGRGRQREK 649
E + L G + +K
Sbjct: 150 ENV-LRTGTKLQK 161
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,123,455
Number of Sequences: 28952
Number of extensions: 189686
Number of successful extensions: 854
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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