Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30583
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    26   0.38 
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    24   1.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   3.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   3.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   3.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   3.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   4.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   6.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   8.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.2  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -1

Query: 636 LGLGQCYPPDRVLHQTPY-HLVTVQDLTSQVQHSRAVIRTDRPT 508
           +G+ +  PP RVLHQ P  H      L  Q QH R  + T  PT
Sbjct: 182 MGVHRAKPPMRVLHQCPVCHKKFTNALVLQ-QHIR--LHTGEPT 222


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 594 QTPYHLVTVQDLTSQVQHSRAVIRTDRPTIPA 499
           Q+ +H+ T  +   +V HS ++ R+ R TI A
Sbjct: 134 QSYFHIATTSNEFIRVHHSGSITRSIRLTITA 165


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +1

Query: 319 RRKLSFRMLSSWYCRNLRRCRSSICK*ATERVE*ARPDRH 438
           R KL+   +  W+     R R  I   AT  V    P+R+
Sbjct: 256 RTKLTEARIQVWFSNRRARLRKQITSAATPLVRSYAPERY 295


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 342 HSEA*LPPPNALHPYYLWVEIK 277
           H+ + +P P  + P Y W+++K
Sbjct: 182 HNLSSVPQPQPVLPTYKWMQVK 203


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 342 HSEA*LPPPNALHPYYLWVEIK 277
           H+ + +P P  + P Y W+++K
Sbjct: 182 HNLSSVPQPQPVLPTYKWMQVK 203


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 342 HSEA*LPPPNALHPYYLWVEIK 277
           H+ + +P P  + P Y W+++K
Sbjct: 182 HNLSSVPQPQPVLPTYKWMQVK 203


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 188  TNVSTYKSDAGVETIKLELQENLISWISNGV 96
            T  +TYK D  +  + + L   +I+W   GV
Sbjct: 1315 TFTTTYKEDVTLPCLAVGLPPPVITWKIKGV 1345


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 288 PINNMGEVHLAEEVKLPNV 344
           P+N + EV L +EV+ PN+
Sbjct: 575 PLNAIVEVVLVDEVQSPNL 593


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 557 RPRYNIHGP**EQTDQQFRP 498
           R R ++HGP  +   Q++RP
Sbjct: 93  RDRRSLHGPQQQMDGQEYRP 112


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 288 PINNMGEVHLAEEVKLPNV 344
           P+N + E+ L +EV+ PN+
Sbjct: 575 PLNAIVEIVLVDEVQQPNL 593


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 457 YLYRNGGAGPVELIQLS 407
           Y Y NG AGP+ +   S
Sbjct: 94  YSYANGAAGPIPVSMAS 110


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -3

Query: 601 PSSNALPPRNRSRFNVPGTTFTGRDKNRQTN 509
           P +N  P   +  FN+P       DKNR  N
Sbjct: 227 PQNN--PKNKQHNFNLPPGAIPVPDKNRPRN 255


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +3

Query: 417  ISSTGPAPPLR*RYYCRLDAVIVYHLKWPELLVCL 521
            IS  GP  P    ++C     I+  L  P+   CL
Sbjct: 968  ISQDGPLAPSSLFFFCMAAEFIIAALLHPQEFNCL 1002


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +3

Query: 417  ISSTGPAPPLR*RYYCRLDAVIVYHLKWPELLVCL 521
            IS  GP  P    ++C     I+  L  P+   CL
Sbjct: 968  ISQDGPLAPSSLFFFCMAAEFIIAALLHPQEFNCL 1002


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,235
Number of Sequences: 336
Number of extensions: 3888
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)