Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30581
         (690 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    36   0.93 
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    36   1.2  
UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;...    33   8.7  
UniRef50_Q2Y889 Cluster: Tetratricopeptide TPR_4; n=1; Nitrososp...    33   8.7  
UniRef50_Q1ASW3 Cluster: PfkB; n=1; Rubrobacter xylanophilus DSM...    33   8.7  

>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 35.9 bits (79), Expect = 0.93
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +2

Query: 617 HWPSFYNVVTGKTPGVTQL 673
           HWPSFYNVVTGKT  +  L
Sbjct: 5   HWPSFYNVVTGKTLALPNL 23


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +2

Query: 566 QGGARYPIRPIVSRIT 613
           +GGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275


>UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 195

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 619 LAVVLQRRDWENPWR 663
           LAVVLQRRDWENP +
Sbjct: 179 LAVVLQRRDWENPMK 193


>UniRef50_Q2Y889 Cluster: Tetratricopeptide TPR_4; n=1; Nitrosospira
           multiformis ATCC 25196|Rep: Tetratricopeptide TPR_4 -
           Nitrosospira multiformis (strain ATCC 25196 / NCIMB
           11849)
          Length = 900

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -3

Query: 259 GWRR-RQWSELELELQLGWRRRRWSELEQELQL 164
           GW R ++  +L+  ++  W+RR W EL+Q L++
Sbjct: 554 GWERLKRIEDLQRLMRFSWKRRNWDELDQWLEV 586


>UniRef50_Q1ASW3 Cluster: PfkB; n=1; Rubrobacter xylanophilus DSM
           9941|Rep: PfkB - Rubrobacter xylanophilus (strain DSM
           9941 / NBRC 16129)
          Length = 382

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -3

Query: 247 RQWSELELELQLGWRRRR 194
           R+W E+EL ++ GWRRRR
Sbjct: 341 RRWEEVELRIERGWRRRR 358


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 418,093,560
Number of Sequences: 1657284
Number of extensions: 5718100
Number of successful extensions: 14986
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14949
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)