Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30580
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.53 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    24   0.92 
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    24   0.92 
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    24   0.92 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.5  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   6.5  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    21   8.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.6  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 343 CFNLELKRLTPASDAAGAISAIVTSNIHQP 254
           CFN+ LKR  P +++A     +    +H+P
Sbjct: 177 CFNIRLKRAGPRTESA-VYEPVRIMGVHRP 205


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -2

Query: 497 IIWLQLSKYHISFMSSSAEIYGTFFRFCSNN--VIIHEFFSEIL 372
           ++WL LS       ++ A  Y T+  F   N  V ++ F SEI+
Sbjct: 229 VLWLSLSDLLQKMGNAYARTYSTYSLFMMANITVAVYGFTSEIV 272


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -2

Query: 497 IIWLQLSKYHISFMSSSAEIYGTFFRFCSNN--VIIHEFFSEIL 372
           ++WL LS       ++ A  Y T+  F   N  V ++ F SEI+
Sbjct: 229 VLWLSLSDLLQKMGNAYARTYSTYSLFMMANITVAVYGFTSEIV 272


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -2

Query: 497 IIWLQLSKYHISFMSSSAEIYGTFFRFCSNN--VIIHEFFSEIL 372
           ++WL LS       ++ A  Y T+  F   N  V ++ F SEI+
Sbjct: 229 VLWLSLSDLLQKMGNAYARTYSTYSLFMMANITVAVYGFTSEIV 272


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 306 QMQPVQSAPLLLAISTNRFDDFCFSSLC 223
           ++Q + S PLL+ I++     FC    C
Sbjct: 233 EIQTIFSVPLLMKIASQFVGIFCSLYFC 260


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 306 QMQPVQSAPLLLAISTNRFDDFCFSSLC 223
           ++Q + S PLL+ I++     FC    C
Sbjct: 58  EIQTIFSVPLLMKIASQFVGIFCSLYFC 85


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 229 FMLCKRHKKK 200
           F LCK+HK K
Sbjct: 34  FRLCKKHKTK 43


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 229 FMLCKRHKKK 200
           F LCK+HK K
Sbjct: 34  FRLCKKHKTK 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,372
Number of Sequences: 336
Number of extensions: 2998
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)