Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30580
         (636 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73899-1|CAA98073.3|  433|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum...    28   4.9  
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p...    27   8.5  
Z50006-2|CAD44148.1|  523|Caenorhabditis elegans Hypothetical pr...    27   8.5  
AL117203-6|CAB60419.1|  234|Caenorhabditis elegans Hypothetical ...    27   8.5  
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ...    27   8.5  
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ...    27   8.5  

>Z73899-1|CAA98073.3|  433|Caenorhabditis elegans Hypothetical
           protein ZK829.3 protein.
          Length = 433

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +3

Query: 432 PIYLCRARHEGDMILGQLKPDYSSCAVSGSKSYSIFEVLENIENASLIDWIPWFKFNARP 611
           P  L  A+  G+    +L P+YS     GS ++        +   +LID +   KFNA P
Sbjct: 208 PWMLPEAKKRGEFDKLKLDPNYSKAGTEGSLTHCFLRYAPVVRKLTLID-LETLKFNAIP 266


>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
            homolog protein 1 protein.
          Length = 1722

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 24/93 (25%), Positives = 44/93 (47%)
 Frame = +3

Query: 48   ILAHRED*HIYRRTYWKNIF*KVLKKKTLSKCTRAIYTSCVKFNILLVSFNFFLCLLQSI 227
            I AH ++ HI+  T  K+     L KK L+  T +   +  KF+ ++   N+   +L   
Sbjct: 1034 IKAHSQNGHIFTLTIDKSTLSAYLFKKRLALATNSGSGTIQKFDSVIADGNWHQIILNPH 1093

Query: 228  KMKNRSRQSGWWILLVTMALIAPAASEAGVNLF 326
            K+   S      +  ++   + PA S++G +LF
Sbjct: 1094 KVLIDS------VKFISDNQLYPAESKSGASLF 1120


>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/55 (21%), Positives = 28/55 (50%)
 Frame = +3

Query: 468 MILGQLKPDYSSCAVSGSKSYSIFEVLENIENASLIDWIPWFKFNARPHGAVASS 632
           +I GQ+KP+Y    +  S+   +     ++ N + ++ I + +  ++  G  AS+
Sbjct: 439 IIAGQMKPEYGEVMMEQSQRPLMISKTTDVPNVNYLNVIQYLRLISKMRGVSAST 493


>Z50006-2|CAD44148.1|  523|Caenorhabditis elegans Hypothetical
           protein T07C5.1c protein.
          Length = 523

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 480 QLKPDYSSCAVSGSKSYSIFEVLENIENASLIDWIP 587
           Q  PDY     + +   S  +    ++N  L+DW+P
Sbjct: 328 QKLPDYHFVVKTTADDESSAQFFSTVQNVDLVDWVP 363


>AL117203-6|CAB60419.1|  234|Caenorhabditis elegans Hypothetical
           protein Y48C3A.9 protein.
          Length = 234

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +3

Query: 207 LCLLQSIKMKNRSRQSGWWILLVTMALIAPAASEAGVNLFNSRLK 341
           L    S K+ ++S    WW+L   +   AP   +AG + F++  K
Sbjct: 56  LAAANSTKLSDKSFLLEWWLLFWDLYSAAPERRDAGGDPFSAEAK 100


>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/55 (21%), Positives = 28/55 (50%)
 Frame = +3

Query: 468 MILGQLKPDYSSCAVSGSKSYSIFEVLENIENASLIDWIPWFKFNARPHGAVASS 632
           +I GQ+KP+Y    +  S+   +     ++ N + ++ I + +  ++  G  AS+
Sbjct: 439 IIAGQMKPEYGEVMMEQSQRPLMISKTTDVPNVNYLNVIQYLRLISKMRGVSAST 493


>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/55 (21%), Positives = 28/55 (50%)
 Frame = +3

Query: 468 MILGQLKPDYSSCAVSGSKSYSIFEVLENIENASLIDWIPWFKFNARPHGAVASS 632
           +I GQ+KP+Y    +  S+   +     ++ N + ++ I + +  ++  G  AS+
Sbjct: 439 IIAGQMKPEYGEVMMEQSQRPLMISKTTDVPNVNYLNVIQYLRLISKMRGVSAST 493


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,126,674
Number of Sequences: 27780
Number of extensions: 282105
Number of successful extensions: 760
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)