Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30578
         (363 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0122 + 1495426-1495815                                           33   0.069
01_06_1749 - 39636951-39638102                                         26   7.9  

>10_01_0122 + 1495426-1495815
          Length = 129

 Score = 33.1 bits (72), Expect = 0.069
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = -1

Query: 363 FFFFFFAYVSGRVHSPPGVKWLLEPIDIYNVN 268
           FFFFFF ++SG + +  G +  L+P+ +Y V+
Sbjct: 16  FFFFFFFFLSGCLRAGAGDRGALDPVLLYGVD 47


>01_06_1749 - 39636951-39638102
          Length = 383

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 233 SIIVTTAAPPFKPKRITA 180
           S + + AAPPF P RIT+
Sbjct: 164 SSVASAAAPPFDPSRITS 181


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,835,616
Number of Sequences: 37544
Number of extensions: 218458
Number of successful extensions: 490
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 566473892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)