Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30577
         (794 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    23   3.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.7  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    22   6.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.6  

>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 184 HCLRQALSASVIPRHLSLSLATRP 113
           HC RQ +  + + RHL +    RP
Sbjct: 42  HCDRQFVQVANLRRHLRVHTGERP 65


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 184 HCLRQALSASVIPRHLSLSLATRP 113
           HC RQ +  + + RHL +    RP
Sbjct: 195 HCDRQFVQVANLRRHLRVHTGERP 218


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 387 STHYYFKYLGNDWTKKGGWKVLK 455
           S HY  + LG D     G+K+ K
Sbjct: 61  SVHYISRELGEDMVTTTGYKLRK 83


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 205 PLTSQFTWKNIGESVLILFVVFTGNPWT 288
           P    +T+  +  SVL+ F+ +  N WT
Sbjct: 46  PYLKSYTYIKLVVSVLMDFIAYFFNFWT 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,902
Number of Sequences: 336
Number of extensions: 4366
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)