Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30577
         (794 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC010874-1|AAH10874.1|  313|Homo sapiens DIM1 dimethyladenosine ...    49   2e-05
AJ009761-1|CAA08815.1|  157|Homo sapiens putative dimethyladenos...    49   2e-05
AF102147-1|AAC97955.1|  313|Homo sapiens putative dimethyladenos...    49   2e-05
AF091078-1|AAC72947.1|  125|Homo sapiens unknown protein.              49   2e-05
AY028423-1|AAK27730.1|  852|Homo sapiens PRIP-interacting protei...    33   1.2  
AF432215-1|AAL99922.1|  853|Homo sapiens CLL-associated antigen ...    33   1.2  
AF286340-1|AAK83025.1|  853|Homo sapiens hepatocellular carcinom...    33   1.2  
CR456920-1|CAG33201.1|  128|Homo sapiens NDUFB6 protein.               31   6.3  
BC029247-1|AAH29247.1|  128|Homo sapiens NADH dehydrogenase (ubi...    31   6.3  
BC009801-1|AAH09801.1|  128|Homo sapiens NADH dehydrogenase (ubi...    31   6.3  
AL353671-8|CAH71257.1|  128|Homo sapiens NADH dehydrogenase (ubi...    31   6.3  
AF035840-1|AAC68838.1|  128|Homo sapiens NADH:ubiquinone oxidore...    31   6.3  
AL353671-7|CAH71258.1|  113|Homo sapiens NADH dehydrogenase (ubi...    30   8.4  

>BC010874-1|AAH10874.1|  313|Homo sapiens DIM1 dimethyladenosine
           transferase 1-like (S. cerevisiae) protein.
          Length = 313

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = -2

Query: 781 RARPMDIDDFMKLLHAFNAEGIHFA 707
           RAR MDIDDF++LLH FNAEGIHF+
Sbjct: 289 RARSMDIDDFIRLLHGFNAEGIHFS 313


>AJ009761-1|CAA08815.1|  157|Homo sapiens putative dimethyladenosine
           transferase protein.
          Length = 157

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = -2

Query: 781 RARPMDIDDFMKLLHAFNAEGIHFA 707
           RAR MDIDDF++LLH FNAEGIHF+
Sbjct: 133 RARSMDIDDFIRLLHGFNAEGIHFS 157


>AF102147-1|AAC97955.1|  313|Homo sapiens putative dimethyladenosine
           transferase protein.
          Length = 313

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = -2

Query: 781 RARPMDIDDFMKLLHAFNAEGIHFA 707
           RAR MDIDDF++LLH FNAEGIHF+
Sbjct: 289 RARSMDIDDFIRLLHGFNAEGIHFS 313


>AF091078-1|AAC72947.1|  125|Homo sapiens unknown protein.
          Length = 125

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = -2

Query: 781 RARPMDIDDFMKLLHAFNAEGIHFA 707
           RAR MDIDDF++LLH FNAEGIHF+
Sbjct: 101 RARSMDIDDFIRLLHGFNAEGIHFS 125


>AY028423-1|AAK27730.1|  852|Homo sapiens PRIP-interacting protein
           PIPMT protein.
          Length = 852

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = +3

Query: 162 ERAWRKQWLKDQVLAAHEPVHVEEYWRERT 251
           + +WRK++ +D +LA+ +P  +E+Y   RT
Sbjct: 139 QESWRKEYEEDDILASDDPSSIEQYENTRT 168


>AF432215-1|AAL99922.1|  853|Homo sapiens CLL-associated antigen
           KW-2 protein.
          Length = 853

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = +3

Query: 162 ERAWRKQWLKDQVLAAHEPVHVEEYWRERT 251
           + +WRK++ +D +LA+ +P  +E+Y   RT
Sbjct: 139 QESWRKEYEEDDILASDDPSSIEQYENTRT 168


>AF286340-1|AAK83025.1|  853|Homo sapiens hepatocellular
           carcinoma-associated antigen 137 protein.
          Length = 853

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = +3

Query: 162 ERAWRKQWLKDQVLAAHEPVHVEEYWRERT 251
           + +WRK++ +D +LA+ +P  +E+Y   RT
Sbjct: 139 QESWRKEYEEDDILASDDPSSIEQYENTRT 168


>CR456920-1|CAG33201.1|  128|Homo sapiens NDUFB6 protein.
          Length = 128

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 25/105 (23%), Positives = 47/105 (44%)
 Frame = +3

Query: 165 RAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLFAKLTPMLGEQRAAHYR 344
           R  R++WLKDQ L+  EPV       ++  P+ +F+ K L+        + G  + + + 
Sbjct: 16  RELRRRWLKDQELSPREPVLPP----QKMGPMEKFWNKFLENKSPWRKMVHGVYKKSIFV 71

Query: 345 YISGKLGLIAVAMLSTHYYFKYLGNDWTKKGGWKVLKTKPMVLPG 479
           +       + V +   HYY KY       +  + +++ K  + PG
Sbjct: 72  FTH-----VLVPVWIIHYYMKY----HVSEKPYGIVEKKSRIFPG 107


>BC029247-1|AAH29247.1|  128|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 6, 17kDa protein.
          Length = 128

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 25/105 (23%), Positives = 47/105 (44%)
 Frame = +3

Query: 165 RAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLFAKLTPMLGEQRAAHYR 344
           R  R++WLKDQ L+  EPV       ++  P+ +F+ K L+        + G  + + + 
Sbjct: 16  RELRRRWLKDQELSPREPVLPP----QKMGPMEKFWNKFLENKSPWRKMVHGVYKKSIFV 71

Query: 345 YISGKLGLIAVAMLSTHYYFKYLGNDWTKKGGWKVLKTKPMVLPG 479
           +       + V +   HYY KY       +  + +++ K  + PG
Sbjct: 72  FTH-----VLVPVWIIHYYMKY----HVSEKPYGIVEKKSRIFPG 107


>BC009801-1|AAH09801.1|  128|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 6, 17kDa protein.
          Length = 128

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 25/105 (23%), Positives = 47/105 (44%)
 Frame = +3

Query: 165 RAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLFAKLTPMLGEQRAAHYR 344
           R  R++WLKDQ L+  EPV       ++  P+ +F+ K L+        + G  + + + 
Sbjct: 16  RELRRRWLKDQELSPREPVLPP----QKMGPMEKFWNKFLENKSPWRKMVHGVYKKSIFV 71

Query: 345 YISGKLGLIAVAMLSTHYYFKYLGNDWTKKGGWKVLKTKPMVLPG 479
           +       + V +   HYY KY       +  + +++ K  + PG
Sbjct: 72  FTH-----VLVPVWIIHYYMKY----HVSEKPYGIVEKKSRIFPG 107


>AL353671-8|CAH71257.1|  128|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 6, 17kDa protein.
          Length = 128

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 25/105 (23%), Positives = 47/105 (44%)
 Frame = +3

Query: 165 RAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLFAKLTPMLGEQRAAHYR 344
           R  R++WLKDQ L+  EPV       ++  P+ +F+ K L+        + G  + + + 
Sbjct: 16  RELRRRWLKDQELSPREPVLPP----QKMGPMEKFWNKFLENKSPWRKMVHGVYKKSIFV 71

Query: 345 YISGKLGLIAVAMLSTHYYFKYLGNDWTKKGGWKVLKTKPMVLPG 479
           +       + V +   HYY KY       +  + +++ K  + PG
Sbjct: 72  FTH-----VLVPVWIIHYYMKY----HVSEKPYGIVEKKSRIFPG 107


>AF035840-1|AAC68838.1|  128|Homo sapiens NADH:ubiquinone
           oxidoreductase B17 subunit protein.
          Length = 128

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 25/105 (23%), Positives = 47/105 (44%)
 Frame = +3

Query: 165 RAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLFAKLTPMLGEQRAAHYR 344
           R  R++WLKDQ L+  EPV       ++  P+ +F+ K L+        + G  + + + 
Sbjct: 16  RELRRRWLKDQELSPREPVLPP----QKMGPMEKFWNKFLENKSPWRKMVHGVYKKSIFV 71

Query: 345 YISGKLGLIAVAMLSTHYYFKYLGNDWTKKGGWKVLKTKPMVLPG 479
           +       + V +   HYY KY       +  + +++ K  + PG
Sbjct: 72  FTH-----VLVPVWIIHYYMKY----HVSEKPYGIVEKKSRIFPG 107


>AL353671-7|CAH71258.1|  113|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 6, 17kDa protein.
          Length = 113

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 22/82 (26%), Positives = 38/82 (46%)
 Frame = +3

Query: 165 RAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLFAKLTPMLGEQRAAHYR 344
           R  R++WLKDQ L+  EPV       ++  P+ +F+ K L+        + G  + + + 
Sbjct: 16  RELRRRWLKDQELSPREPVLPP----QKMGPMEKFWNKFLENKSPWRKMVHGVYKKSIFV 71

Query: 345 YISGKLGLIAVAMLSTHYYFKY 410
           +       + V +   HYY KY
Sbjct: 72  FTH-----VLVPVWIIHYYMKY 88


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,083,053
Number of Sequences: 237096
Number of extensions: 2540004
Number of successful extensions: 4397
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4397
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)