Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30577
         (794 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68303-4|CAA92637.1|  210|Caenorhabditis elegans Hypothetical pr...    81   7e-16
Z47075-1|CAA87382.2|  308|Caenorhabditis elegans Hypothetical pr...    33   0.31 
U80030-4|AAG24162.2|  370|Caenorhabditis elegans Serpentine rece...    29   5.1  
U97592-4|AAB52872.1|  450|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U80030-6|AAG24164.1|  367|Caenorhabditis elegans Serpentine rece...    28   6.7  

>Z68303-4|CAA92637.1|  210|Caenorhabditis elegans Hypothetical
           protein ZK809.3 protein.
          Length = 210

 Score = 81.4 bits (192), Expect = 7e-16
 Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
 Frame = +3

Query: 102 MTIVGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKP 281
           M++   +A ER R  G++ AER WRK+W+ DQ L A EPV V+   R+  NPIR  YR P
Sbjct: 41  MSLELHMADERVRAAGLSPAEREWRKKWVHDQHLHADEPVVVDAVHRQ-LNPIRTAYRLP 99

Query: 282 LDVLFAK-LTPMLGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGNDWTKKGGWKVLKT 458
            D  +   L P  G       R  + KL +  V + + +YY+KY   DWT   G + +  
Sbjct: 100 WDKFYLHYLKPTFGVYYGTAIRVTAPKLLMAFVVVQTAYYYWKYEVKDWTHLRGLESMPQ 159

Query: 459 KPMV 470
           K ++
Sbjct: 160 KEVI 163


>Z47075-1|CAA87382.2|  308|Caenorhabditis elegans Hypothetical
           protein E02H1.1 protein.
          Length = 308

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -2

Query: 787 QMRARPMDIDDFMKLLHAFNAEGIHF 710
           + RAR M ++DF+ LL AFN   IHF
Sbjct: 281 ESRARKMRVEDFLALLLAFNKADIHF 306


>U80030-4|AAG24162.2|  370|Caenorhabditis elegans Serpentine
           receptor, class w protein120 protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = -1

Query: 578 CLSIKLFLNNRALEFPFSVIRIGFL-RFEWESRLSRKNHWFGF 453
           C++I  F+    +EFP+  + +GFL  F+++S +SR   +FGF
Sbjct: 275 CVTITFFI----VEFPYG-LSLGFLWMFDYDSGISRILSYFGF 312


>U97592-4|AAB52872.1|  450|Caenorhabditis elegans Hypothetical
           protein C14A11.5 protein.
          Length = 450

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 198 VLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLFAKLTPMLGEQRAAHYRY 347
           V+ AH  V   +YW++ T P    Y +   +LF K  P + +    + RY
Sbjct: 373 VVKAHI-VRKLDYWKKSTQPQAAHYTEMYQLLFEKCGPSISDVIMNYMRY 421


>U80030-6|AAG24164.1|  367|Caenorhabditis elegans Serpentine
           receptor, class w protein119 protein.
          Length = 367

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = -1

Query: 578 CLSIKLFLNNRALEFPFSVIRIGFL-RFEWESRLSRKNHWFGF 453
           C++I  F+    +EFP+  + +GFL  F+++S +SR   +FGF
Sbjct: 277 CVTITFFI----VEFPYG-LSLGFLWMFDYDSGISRILSFFGF 314


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,231,515
Number of Sequences: 27780
Number of extensions: 401195
Number of successful extensions: 1032
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)