Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30576
(404 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 179 6e-46
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 179 6e-46
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 179 6e-46
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 175 1e-44
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 113 3e-26
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 113 3e-26
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 96 1e-20
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 74 3e-14
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 61 3e-10
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 61 3e-10
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 61 3e-10
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 60 8e-10
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 60 8e-10
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 37 0.006
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 36 0.008
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 32 0.14
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 32 0.18
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 32 0.18
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 32 0.18
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 32 0.18
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 31 0.24
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.31
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.31
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 0.55
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 0.55
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 0.73
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 0.96
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 0.96
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 29 1.3
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z68342-3|CAA92773.1| 751|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 27 6.8
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 27 6.8
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 27 6.8
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 26 9.0
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 179 bits (436), Expect = 6e-46
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +3
Query: 132 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDXIALWKFETSKYYVTII 311
GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID IALWKFET+KYY+TII
Sbjct: 32 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID-IALWKFETAKYYITII 90
Query: 312 DAPGHRDFIKNMITGTSQADCAVLIVXAGT 401
DAPGHRDFIKNMITGTSQADCAVL+V GT
Sbjct: 91 DAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 127
MGKEK HINIVVIGHVDSGKSTTTGHLIYK
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYK 30
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 179 bits (436), Expect = 6e-46
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +3
Query: 132 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDXIALWKFETSKYYVTII 311
GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID IALWKFET+KYY+TII
Sbjct: 32 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID-IALWKFETAKYYITII 90
Query: 312 DAPGHRDFIKNMITGTSQADCAVLIVXAGT 401
DAPGHRDFIKNMITGTSQADCAVL+V GT
Sbjct: 91 DAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 127
MGKEK HINIVVIGHVDSGKSTTTGHLIYK
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYK 30
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 179 bits (436), Expect = 6e-46
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +3
Query: 132 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDXIALWKFETSKYYVTII 311
GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID IALWKFET+KYY+TII
Sbjct: 32 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID-IALWKFETAKYYITII 90
Query: 312 DAPGHRDFIKNMITGTSQADCAVLIVXAGT 401
DAPGHRDFIKNMITGTSQADCAVL+V GT
Sbjct: 91 DAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 127
MGKEK HINIVVIGHVDSGKSTTTGHLIYK
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYK 30
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 175 bits (426), Expect = 1e-44
Identities = 82/86 (95%), Positives = 85/86 (98%)
Frame = +3
Query: 132 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDXIALWKFETSKYYVTII 311
GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID IALWKFET+KYY+TII
Sbjct: 32 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID-IALWKFETAKYYITII 90
Query: 312 DAPGHRDFIKNMITGTSQADCAVLIV 389
DAPGHRDFIKNMITGTSQADCAVL+V
Sbjct: 91 DAPGHRDFIKNMITGTSQADCAVLVV 116
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 127
MGKEK HINIVVIGHVDSGKSTTTGHLIYK
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYK 30
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 113 bits (273), Expect = 3e-26
Identities = 53/88 (60%), Positives = 66/88 (75%)
Frame = +3
Query: 138 IDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDXIALWKFETSKYYVTIIDA 317
+D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+D I FETS + ++DA
Sbjct: 197 VDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMD-IGRTSFETSHRRIVLLDA 255
Query: 318 PGHRDFIKNMITGTSQADCAVLIVXAGT 401
PGH+DFI NMITGTSQAD A+L+V A T
Sbjct: 256 PGHKDFISNMITGTSQADAAILVVNATT 283
Score = 40.3 bits (90), Expect = 5e-04
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +2
Query: 47 EKTHINIVVIGHVDSGKSTTTGHLIY 124
+K IN++V+GHVD+GKST GHL++
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLH 192
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 113 bits (273), Expect = 3e-26
Identities = 53/88 (60%), Positives = 66/88 (75%)
Frame = +3
Query: 138 IDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDXIALWKFETSKYYVTIIDA 317
+D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+D I FETS + ++DA
Sbjct: 215 VDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMD-IGRTSFETSHRRIVLLDA 273
Query: 318 PGHRDFIKNMITGTSQADCAVLIVXAGT 401
PGH+DFI NMITGTSQAD A+L+V A T
Sbjct: 274 PGHKDFISNMITGTSQADAAILVVNATT 301
Score = 40.3 bits (90), Expect = 5e-04
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +2
Query: 47 EKTHINIVVIGHVDSGKSTTTGHLIY 124
+K IN++V+GHVD+GKST GHL++
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLH 210
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/88 (48%), Positives = 63/88 (71%)
Frame = +3
Query: 132 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDXIALWKFETSKYYVTII 311
G +DKRT+EK+E+EA+E G+ S+ +W +D ERE+G T++ + FET K + TI+
Sbjct: 134 GMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVE-VGRAYFETEKRHFTIL 192
Query: 312 DAPGHRDFIKNMITGTSQADCAVLIVXA 395
DAPGH+ F+ NMI G +QAD AVL++ A
Sbjct: 193 DAPGHKSFVPNMIVGANQADLAVLVISA 220
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +2
Query: 41 GKEKTHINIVVIGHVDSGKSTTTGHLIYKXXWY----*QTYHREVREGG 175
G K HIN+V +GHVD+GKST G L++ + Y RE +E G
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKG 152
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 74.1 bits (174), Expect = 3e-14
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +3
Query: 132 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 239
GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 32 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 127
MGKEK HINIVVIGHVDSGKSTTTGHLIYK
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYK 30
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 60.9 bits (141), Expect = 3e-10
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +3
Query: 216 LDKLKAERERGITIDXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXA 395
+D E+ RGITI+ L ++ET+K + ID PGH D+IKNMITG +Q + A+L+V A
Sbjct: 87 IDNAPEEKARGITINAFHL-EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAA 145
Score = 33.1 bits (72), Expect = 0.078
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 44 KEKTHINIVVIGHVDSGKSTTT 109
++K H+N+ IGHVD GK+T T
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLT 66
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 60.9 bits (141), Expect = 3e-10
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +3
Query: 216 LDKLKAERERGITIDXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXA 395
+D E+ RGITI+ L ++ET+K + ID PGH D+IKNMITG +Q + A+L+V A
Sbjct: 88 IDNAPEEKARGITINAFHL-EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAA 146
Score = 33.1 bits (72), Expect = 0.078
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 44 KEKTHINIVVIGHVDSGKSTTT 109
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 60.9 bits (141), Expect = 3e-10
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +3
Query: 216 LDKLKAERERGITIDXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXA 395
+D E+ RGITI+ L ++ET+K + ID PGH D+IKNMITG +Q + A+L+V A
Sbjct: 88 IDNAPEEKARGITINAFHL-EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAA 146
Score = 33.1 bits (72), Expect = 0.078
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 44 KEKTHINIVVIGHVDSGKSTTT 109
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 59.7 bits (138), Expect = 8e-10
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = +3
Query: 216 LDKLKAERERGITIDXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXA 395
+DK K E++RGITI+ +A +E+ + D PGH DFIKNMI GTSQ D AVL++ A
Sbjct: 83 IDKGKEEKKRGITIN-VAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAA 141
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 50 KTHINIVVIGHVDSGKSTTT 109
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 59.7 bits (138), Expect = 8e-10
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = +3
Query: 216 LDKLKAERERGITIDXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXA 395
+DK K E++RGITI+ +A +E+ + D PGH DFIKNMI GTSQ D AVL++ A
Sbjct: 83 IDKGKEEKKRGITIN-VAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAA 141
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 50 KTHINIVVIGHVDSGKSTTT 109
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 41.9 bits (94), Expect = 2e-04
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +3
Query: 213 VLDKLKAERERGITIDXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVX 392
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+V
Sbjct: 76 MLDKLQVERERGITVKAQTA-ALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVA 134
Query: 393 A 395
A
Sbjct: 135 A 135
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 36.7 bits (81), Expect = 0.006
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +3
Query: 213 VLDKLKAERERGITIDXIALWKFETSKYYVTIIDAPGHRDF 335
V D L ERERGIT+ A+ + + + +ID PGH DF
Sbjct: 64 VTDFLDIERERGITVQSAAV-NLDWKGHRINLIDTPGHVDF 103
Score = 31.1 bits (67), Expect = 0.31
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 62 NIVVIGHVDSGKSTTTGHLIY 124
NI VI HVD+GK+T T L+Y
Sbjct: 27 NIGVIAHVDAGKTTVTERLLY 47
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 36.3 bits (80), Expect = 0.008
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 216 LDKLKAERERGITIDXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 389
+D + ER+RGITI A + + + IID PGH DF + D AVL++
Sbjct: 87 MDFMDLERQRGITIQSAATY-VDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL 143
Score = 28.3 bits (60), Expect = 2.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 62 NIVVIGHVDSGKSTTTGHLIY 124
NI + H+DSGK+T T ++Y
Sbjct: 46 NIGISAHIDSGKTTVTERILY 66
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 32.3 bits (70), Expect = 0.14
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = -1
Query: 350 DHVLDEISVSRSINDGNIVLASFELPESNXIDCDTTLTLSL*FVQYPSIFEGSFTHF 180
DH+ EIS S N + + S + SN C T T++L +Y F+GSF+ F
Sbjct: 49 DHITYEISTSPPSNSFDQISDSIRILLSNQSSCPETCTVTL--NRYIDTFQGSFSIF 103
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 31.9 bits (69), Expect = 0.18
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +3
Query: 216 LDKLKAERERGITIDXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 389
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGI-SLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 31.9 bits (69), Expect = 0.18
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +3
Query: 216 LDKLKAERERGITIDXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 389
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGI-SLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 31.9 bits (69), Expect = 0.18
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +3
Query: 219 DKLKAERERGITIDX----IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 387 VXA 395
V A
Sbjct: 232 VDA 234
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 31.9 bits (69), Expect = 0.18
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +3
Query: 219 DKLKAERERGITIDX----IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 387 VXA 395
V A
Sbjct: 107 VDA 109
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 31.5 bits (68), Expect = 0.24
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +3
Query: 186 GKGSFKYAWVLDKLKAERERGITIDXIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTS 362
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGIT-QHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAK 226
Query: 363 QADCAVLIVXA 395
AD VL+V A
Sbjct: 227 GADIVVLVVAA 237
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.31
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 14 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 124
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.31
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 14 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 124
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 30.3 bits (65), Expect = 0.55
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 127
M +++ N+ VI HVD GKST T L+ K
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSK 42
Score = 27.5 bits (58), Expect = 3.9
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 389
+ + +ID+PGH DF + D A+++V
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALRVTDGALVVV 141
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 0.55
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 127
M +++ N+ VI HVD GKST T L+ K
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSK 42
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 389
+ + +ID+PGH DF + D A+++V
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALGVTDGALVVV 141
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 0.73
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSQADCAVLIV 389
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 0.96
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 141 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 242
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 0.96
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 141 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 242
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 297 YVTIIDAPGHRDFIKNMITGTSQADCAVLIV 389
+V+ +D PGH + M+ G + D A L+V
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLV 158
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 59 INIVVIGHVDSGKSTTT 109
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
Score = 27.1 bits (57), Expect = 5.1
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 389
+ +ID PGH I+ ++ ++ D A++I+
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII 103
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 59 INIVVIGHVDSGKSTTT 109
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z68342-3|CAA92773.1| 751|Caenorhabditis elegans Hypothetical
protein F38E11.4 protein.
Length = 751
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -2
Query: 205 YLKDPLPISWASFSNFSMVRLSIPPPFVDQVTSGG 101
Y+KD SFSN S L IP P D GG
Sbjct: 537 YIKDHFSSCRQSFSNTSFAELHIPFPTEDDSKCGG 571
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.1 bits (57), Expect = 5.1
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +3
Query: 300 VTIIDAPGHRDFI--KNMITGTSQA 368
V IID+ G RDFI KN+ GT+ A
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGTADA 97
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 26.6 bits (56), Expect = 6.8
Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = +3
Query: 138 IDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDXIALWKFETSKYY-VTIID 314
I K EK EK+ V D ++ + R TI +W T YY +T+
Sbjct: 311 IPKNWAEKIEKKMDVTATKKKDSFGVFDLIRTPQMRKRTIANFVMWPVTTMMYYGLTMRS 370
Query: 315 APGHRDFIKNMITGTSQADCAVLIV 389
G +T AV+IV
Sbjct: 371 DVGGGSLFVTFVTSQLMELPAVIIV 395
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 26.6 bits (56), Expect = 6.8
Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = +3
Query: 138 IDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDXIALWKFETSKYY-VTIID 314
I K EK EK+ V D ++ + R TI +W T YY +T+
Sbjct: 277 IPKNWAEKIEKKMDVTATKKKDSFGVFDLIRTPQMRKRTIANFVMWPVTTMMYYGLTMRS 336
Query: 315 APGHRDFIKNMITGTSQADCAVLIV 389
G +T AV+IV
Sbjct: 337 DVGGGSLFVTFVTSQLMELPAVIIV 361
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 26.6 bits (56), Expect = 6.8
Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = +3
Query: 138 IDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDXIALWKFETSKYY-VTIID 314
I K EK EK+ V D ++ + R TI +W T YY +T+
Sbjct: 311 IPKNWAEKIEKKMDVTATKKKDSFGVFDLIRTPQMRKRTIANFVMWPVTTMMYYGLTMRS 370
Query: 315 APGHRDFIKNMITGTSQADCAVLIV 389
G +T AV+IV
Sbjct: 371 DVGGGSLFVTFVTSQLMELPAVIIV 395
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 26.6 bits (56), Expect = 6.8
Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = +3
Query: 138 IDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDXIALWKFETSKYY-VTIID 314
I K EK EK+ V D ++ + R TI +W T YY +T+
Sbjct: 277 IPKNWAEKIEKKMDVTATKKKDSFGVFDLIRTPQMRKRTIANFVMWPVTTMMYYGLTMRS 336
Query: 315 APGHRDFIKNMITGTSQADCAVLIV 389
G +T AV+IV
Sbjct: 337 DVGGGSLFVTFVTSQLMELPAVIIV 361
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 26.2 bits (55), Expect = 9.0
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = +3
Query: 129 GGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDXIALWKFETSKYYVTI 308
GG I+ +EK Q G+ S+ + + KA RER D I +KF S+ +T+
Sbjct: 255 GGDIEHYLLEKSRVIKQAPGERSYHIFYQIMTQKALRERYGLSDNIRDYKF-VSQAEITV 313
Query: 309 IDAPGHRDFIKNMIT 353
PG D + IT
Sbjct: 314 ---PGMNDTEEWQIT 325
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,556,581
Number of Sequences: 27780
Number of extensions: 153579
Number of successful extensions: 458
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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