Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30576
(404 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 183 8e-49
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 180 7e-48
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 129 1e-32
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 98 3e-23
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 29 0.015
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.57
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 1.3
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 1.7
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 3.0
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 5.3
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 5.3
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 5.3
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 20 9.3
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 183 bits (445), Expect = 8e-49
Identities = 88/90 (97%), Positives = 88/90 (97%)
Frame = +3
Query: 132 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDXIALWKFETSKYYVTII 311
GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID IALWKFETSKYYVTII
Sbjct: 32 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID-IALWKFETSKYYVTII 90
Query: 312 DAPGHRDFIKNMITGTSQADCAVLIVXAGT 401
DAPGHRDFIKNMITGTSQADCAVLIV AGT
Sbjct: 91 DAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Score = 64.9 bits (151), Expect = 3e-13
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 127
MGKEK HINIVVIGHVDSGKSTTTGHLIYK
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYK 30
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 180 bits (437), Expect = 7e-48
Identities = 86/89 (96%), Positives = 87/89 (97%)
Frame = +3
Query: 132 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDXIALWKFETSKYYVTII 311
GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID IALWKFET+KYYVTII
Sbjct: 32 GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITID-IALWKFETAKYYVTII 90
Query: 312 DAPGHRDFIKNMITGTSQADCAVLIVXAG 398
DAPGHRDFIKNMITGTSQADCAVLIV AG
Sbjct: 91 DAPGHRDFIKNMITGTSQADCAVLIVAAG 119
Score = 64.9 bits (151), Expect = 3e-13
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 127
MGKEK HINIVVIGHVDSGKSTTTGHLIYK
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYK 30
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 129 bits (311), Expect = 1e-32
Identities = 62/64 (96%), Positives = 62/64 (96%)
Frame = +3
Query: 210 WVLDKLKAERERGITIDXIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 389
WVLDKLKAERERGITID IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV
Sbjct: 1 WVLDKLKAERERGITID-IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 59
Query: 390 XAGT 401
AGT
Sbjct: 60 AAGT 63
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 98.3 bits (234), Expect = 3e-23
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 264 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGT 401
IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV AGT
Sbjct: 2 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 47
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 29.5 bits (63), Expect = 0.015
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXA 395
VT +D PGH FI G D VL+V A
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAA 226
Score = 25.4 bits (53), Expect = 0.25
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 50 KTHINIVVIGHVDSGKST 103
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.57
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 59 INIVVIGHVDSGKST 103
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 1.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 285 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 1.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 285 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 51 FSLPIFG*SRITNCV 7
FSLPIFG I +C+
Sbjct: 57 FSLPIFGTRWIFSCI 71
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 141 DKRTIEKFEKEAQEMG 188
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 141 DKRTIEKFEKEAQEMG 188
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 141 DKRTIEKFEKEAQEMG 188
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 20.2 bits (40), Expect = 9.3
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 241 SRSAFSLSNTQAYLKDPLPISWASFSN 161
+RS F L N +KD L ++ F+N
Sbjct: 78 TRSPFLLLNDPELIKDILIRDFSKFAN 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,841
Number of Sequences: 438
Number of extensions: 1971
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -