Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30575
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 160 5e-40
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 157 4e-39
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 153 8e-38
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 141 4e-34
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 1e-16
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 32 0.24
SB_33101| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 28 4.0
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 28 4.0
SB_33946| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_43369| Best HMM Match : S-antigen (HMM E-Value=2.4) 27 6.9
SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14) 27 6.9
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_33836| Best HMM Match : PsbI (HMM E-Value=2) 27 9.2
SB_5020| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 160 bits (389), Expect = 5e-40
Identities = 79/133 (59%), Positives = 102/133 (76%)
Frame = +1
Query: 118 RXELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 297
R L+ AKL+EQ +RYD+MA MKEV+E +LS EERNLLSV+YKN+VG RRSSWRVI
Sbjct: 84 RETLIYNAKLSEQCDRYDEMAKIMKEVSEKYPKLSKEERNLLSVSYKNIVGQRRSSWRVI 143
Query: 298 SSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNAESKVFYLKMK 477
SSIE+KT S + K+Y+ +EKEL+++C +VLG+L++ LIP A + E+KVFY K+K
Sbjct: 144 SSIEEKTAESS-SLAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEENKVFYFKLK 201
Query: 478 GDYYRYLAEVXTG 516
GDYYRYLAE G
Sbjct: 202 GDYYRYLAEFSHG 214
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 157 bits (382), Expect = 4e-39
Identities = 78/111 (70%), Positives = 85/111 (76%)
Frame = +1
Query: 175 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 354
MA AMKE TE L EERNLLSVAYKNVVGA+RSSWRVISSIEQK EGSERK+Q +
Sbjct: 1 MAKAMKEATEISETLEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLEGSERKKQNTET 60
Query: 355 YRVKVEKELREICYDVLGLLDKHLIPKASNAESKVFYLKMKGDYYRYLAEV 507
YR +E EL E+C VL LL+ LIP A + ESKVFYLKMKGDYYRY EV
Sbjct: 61 YRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKGDYYRYEGEV 111
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 153 bits (371), Expect = 8e-38
Identities = 79/137 (57%), Positives = 97/137 (70%), Gaps = 3/137 (2%)
Frame = +1
Query: 115 TRXELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 294
+R EL+ AK+AEQAERYDDM AM VT+ G L++EERNLLSVAYKNVVGARRSSWRV
Sbjct: 10 SREELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLNDEERNLLSVAYKNVVGARRSSWRV 69
Query: 295 ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKAS---NAESKVFY 465
ISS+EQK E + K+YR + EL C +VL +L+ +L+ N E+KVFY
Sbjct: 70 ISSMEQK--APEEMAALTKKYREDITNELNGKCAEVLDILENYLLKDGQDDINTEAKVFY 127
Query: 466 LKMKGDYYRYLAEVXTG 516
LKM+GDY+RYL EV G
Sbjct: 128 LKMRGDYHRYLVEVAEG 144
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 141 bits (341), Expect = 4e-34
Identities = 72/122 (59%), Positives = 91/122 (74%), Gaps = 3/122 (2%)
Frame = +1
Query: 118 RXELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 297
+ E V AKLAEQAERYDDM +MKEV + G ELS E+RNLLSVAYKNV+GARR+SWR+I
Sbjct: 4 KEEHVYMAKLAEQAERYDDMVNSMKEVAKMGTELSTEDRNLLSVAYKNVIGARRASWRII 63
Query: 298 SSIEQKTE--GSE-RKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNAESKVFYL 468
+SIEQK E G + K +M + YR +E+EL+ IC ++L LLD LI + + ESKVFY
Sbjct: 64 TSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEESKVFYN 123
Query: 469 KM 474
K+
Sbjct: 124 KI 125
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 83.4 bits (197), Expect = 1e-16
Identities = 43/99 (43%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Frame = +1
Query: 115 TRXELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 294
+R ELVQ AKLAEQ ER++D+ MK+ E L+ E RNLLSV YKNVVG++R +WR
Sbjct: 189 SRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNKEHRNLLSVGYKNVVGSKRFAWRH 248
Query: 295 ISSIEQKTEGSERKQQMAK--EYRVKVEKELREICYDVL 405
+ ++ R Q+ +Y+ K+E EL+ +C ++L
Sbjct: 249 LHHDALQSGRYIRDSQLKGIIKYKEKIEMELKTLCREIL 287
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 32.3 bits (70), Expect = 0.24
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = +1
Query: 139 AKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKT 318
AK ++ ER + A K+ E + EE++ L K R+ + + IE+K
Sbjct: 346 AKQKKEQERLEKQAEKEKKEKERLEKKQREEKDRLEKKEKKEEEKRKKEEEINAKIEEKK 405
Query: 319 EGSERKQQMAKEYRVKVEK 375
+ E+K+Q +E K E+
Sbjct: 406 KREEKKKQEEEEKMKKKEQ 424
>SB_33101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 VLFHRPRCPSTRXELVQRAKLAEQAERYDDMAAAMKEVT-ETGVELSNEERNLLSVAYK 258
V F P CP TR R +A Y A MK + + G ELS E+ + A K
Sbjct: 314 VYFTTPPCPGTRATKPFRENIAALVVFYTPSKADMKAILHDYGAELSEEKMKVYMKALK 372
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 29.1 bits (62), Expect = 2.3
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Frame = +1
Query: 127 LVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGAR------RSSW 288
L + K A +R +A+A+ + + + LS K VV + + W
Sbjct: 282 LSEMFKQAVTEDRPKMLASAITKALNQDIHSPSALNLPLSTPAKQVVKTKWDRIREKHQW 341
Query: 289 RVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 444
++S E+ +ER++Q E +VK E++ R+ ++ + HL K SN
Sbjct: 342 NLLSEDEKNKIKAERRKQKRLELKVKREEKERKRLEELKRVSFAHLGMKLSN 393
>SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34)
Length = 512
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 136 RAKLAEQAERYDDMAAAM-KEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQ 312
+ K+ +++E+YD + + KE T+ G + E + N AR + ++ +
Sbjct: 13 KRKIFKKSEKYDRLEEPLEKEGTDGGEIEAEAEVEPHTEEEANYNEARSENCEKNNNNDS 72
Query: 313 KTEGSERKQQMAKEYRVKVEKELRE 387
T ++ +Q KE+ V +EK+L++
Sbjct: 73 STPDAKSQQADIKEWIVSLEKQLKD 97
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 289 RVISSIEQKTEGSERKQQMAKEYRVKVEKELREIC 393
R++ IE+K E E ++ AKE + + E+E + IC
Sbjct: 919 RIMKEIEEK-EKKEEAERKAKEEKEREERERKRIC 952
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 334 KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPK 435
K++M ++Y K+EKE+ Y+++ L K ++ K
Sbjct: 292 KEEMKEKYDGKIEKEMSGAIYEIISRLMKAVVGK 325
>SB_33946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 394 YDVLGLLDKHLIPKASNAESKVFYLKMKGDYY 489
YD ++ HL+P A +++ +K+ DYY
Sbjct: 6 YDSNTVVSHHLLPSAQTRYIRIYPVKVNSDYY 37
>SB_43369| Best HMM Match : S-antigen (HMM E-Value=2.4)
Length = 407
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 274 RRSSWRVISSIEQKT--EGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNA 447
+RS+ + +KT E E+ A + +V L I D + L D+HL+ +
Sbjct: 3 QRSNQNSVRDWVKKTTAESREKTTYAAPSWGSQVLPHLHPIMPDRMYLQDQHLLIAVKSV 62
Query: 448 ESKVFYLKMK 477
ES Y KMK
Sbjct: 63 ESDESYGKMK 72
>SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14)
Length = 708
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 163 RYDDMAAAMKEVTETGVELSNEERNLLSV 249
+YD++ AA+K+ T TG+ S + L V
Sbjct: 57 KYDNLLAAVKDATNTGIRESGIDARLCDV 85
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 163 RYDDMAAAMKEVTETGVELSNEERNLLSV 249
+YD++ AA+K+ T TG+ S + L V
Sbjct: 163 KYDNLLAAVKDATNTGIRESGIDARLCDV 191
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/72 (22%), Positives = 31/72 (43%)
Frame = +1
Query: 112 STRXELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWR 291
+ R +R L Q E D+ + KE+ E ++N + V + ARR +
Sbjct: 2102 ANRAASYERKLLLLQQEEIADLRRSTKEIREKVKAEKPRDQNAVEVTHWYSADARREPYL 2161
Query: 292 VISSIEQKTEGS 327
++S+ + G+
Sbjct: 2162 AVNSVARGNAGN 2173
>SB_33836| Best HMM Match : PsbI (HMM E-Value=2)
Length = 241
Score = 27.1 bits (57), Expect = 9.2
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 130 VQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV-ISSI 306
+ R +L++ Y MAA + E TE E + N+L+ + V A W + +
Sbjct: 152 ISRDQLSQLLLVYVGMAADIMEFTEIIKEDEIRKVNMLN--NNHFVNAVILFWSMSLFQF 209
Query: 307 EQKTEGSERKQQMAKEYRVKVEKELRE 387
G+ER Q ++ + K+E+EL +
Sbjct: 210 TLTISGTERTAQRLEKEKAKIEEELHK 236
>SB_5020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 687
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/43 (20%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +1
Query: 298 SSIEQKTEGSERKQQMAKEYRVKVE----KELREICYDVLGLL 414
+S+ +K E ++ + Y++K++ K+++++C+ V+G++
Sbjct: 20 NSLREKVERKTISNRITRNYKMKLQPMEIKDMKKLCFAVIGVI 62
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,143,686
Number of Sequences: 59808
Number of extensions: 268144
Number of successful extensions: 787
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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