Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30574
         (337 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    32   2.2  
UniRef50_Q11Z36 Cluster: Competence protein; transcription facto...    32   2.9  
UniRef50_A5KA47 Cluster: Putative uncharacterized protein; n=1; ...    31   3.8  
UniRef50_Q4C714 Cluster: Putative uncharacterized protein; n=1; ...    31   5.1  
UniRef50_Q4MZW2 Cluster: Putative uncharacterized protein; n=2; ...    31   5.1  
UniRef50_O45165 Cluster: Serpentine receptor, class h protein 24...    30   8.9  

>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +2

Query: 296 KGGARYPIRPIVSR 337
           +GGARYPIRPIVSR
Sbjct: 260 RGGARYPIRPIVSR 273


>UniRef50_Q11Z36 Cluster: Competence protein; transcription factor;
           n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Competence
           protein; transcription factor - Cytophaga hutchinsonii
           (strain ATCC 33406 / NCIMB 9469)
          Length = 316

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -3

Query: 212 YENQENNY*LFHAQNAYFYESIK 144
           +ENQ  NY LFH  N+  +ESIK
Sbjct: 189 FENQNGNYFLFHFNNSVSFESIK 211


>UniRef50_A5KA47 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 3475

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 102 CKTKQKLHYYYLTTFNAFIKICILGMK*SIVVFLIFI 212
           CK K    Y+++ TF  F+ +CIL    ++  F IFI
Sbjct: 307 CKEKHVWIYHHIVTFFNFLDVCILFTFGALAFFFIFI 343


>UniRef50_Q4C714 Cluster: Putative uncharacterized protein; n=1;
           Crocosphaera watsonii WH 8501|Rep: Putative
           uncharacterized protein - Crocosphaera watsonii
          Length = 202

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 135 LTTFNAFIKICILGMK*SIVVFLIFIHN-IKLLSNLLLWNI 254
           L TF A I   I+G   ++V+ L F+H  + +LS L+ W++
Sbjct: 45  LNTFQAMIGATIIGCFQALVLSLFFVHTWLWILSTLIAWSL 85


>UniRef50_Q4MZW2 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 820

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = +3

Query: 51  LLDKSNV*TVYNTKPSICKTKQKLHYYYLTTFNAFIKICILGMK*SIVVFLIFIHNI-KL 227
           LL KS V  + N        ++  ++YY  T N+FI I I     S+VV L+FI  I KL
Sbjct: 397 LLLKSLVLVMRNMNNLDTVLERSFNFYYFVTTNSFISISIY----SLVVPLLFIRPIVKL 452

Query: 228 LSNLLLWNITIMKQINLV 281
           L +    N+ ++  + LV
Sbjct: 453 LLDPFFDNLPMILGVLLV 470


>UniRef50_O45165 Cluster: Serpentine receptor, class h protein 243;
           n=2; Caenorhabditis elegans|Rep: Serpentine receptor,
           class h protein 243 - Caenorhabditis elegans
          Length = 337

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 280 TKFICFIIVMFHNSKLDNNFILCMKIRKTTIDYFMPKMH 164
           T FICF++  +HN KL+N   L + +  +     M  +H
Sbjct: 261 TTFICFMMFWYHNQKLNNLGYLVLSLHGSVSTIVMILVH 299


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 307,000,045
Number of Sequences: 1657284
Number of extensions: 5243822
Number of successful extensions: 9137
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9135
length of database: 575,637,011
effective HSP length: 87
effective length of database: 431,453,303
effective search space used: 10354879272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)