Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30574
         (337 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   2.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   2.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   2.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    20   6.0  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    20   8.0  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +3

Query: 99  ICKTKQKLHYYYLTTFNAFIKICILGMK*SIVVFLIFIHNIKLLSN 236
           I   K     +Y   F    +  ILG+  +IV FLI +   ++  N
Sbjct: 309 ISTIKDNFPRFYAARFFVINRGTILGILDAIVTFLIVMIQFEMTQN 354



 Score = 20.2 bits (40), Expect = 6.0
 Identities = 5/42 (11%), Positives = 19/42 (45%)
 Frame = +1

Query: 10  KDVLKLILCAVRNYCWIKVMCKQSITLNHQFVKLNKNYIIII 135
           +++  ++    +   W K++    +  NH  ++   +Y + +
Sbjct: 78  QNIYTVLTALTKKPLWFKLLKNLKMVQNHNNIREKSHYCLFV 119


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +3

Query: 99  ICKTKQKLHYYYLTTFNAFIKICILGMK*SIVVFLIFIHNIKLLSN 236
           I   K     +Y   F    +  ILG+  +IV FLI +   ++  N
Sbjct: 309 ISTIKDNFPRFYAARFFVINRGTILGILDAIVTFLIVMIQFEMTQN 354



 Score = 20.2 bits (40), Expect = 6.0
 Identities = 5/42 (11%), Positives = 19/42 (45%)
 Frame = +1

Query: 10  KDVLKLILCAVRNYCWIKVMCKQSITLNHQFVKLNKNYIIII 135
           +++  ++    +   W K++    +  NH  ++   +Y + +
Sbjct: 78  QNIYTVLTALTKKPLWFKLLKNLKMVQNHNNIREKSHYCLFV 119


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 6/27 (22%), Positives = 16/27 (59%)
 Frame = -3

Query: 227 QFYIMYENQENNY*LFHAQNAYFYESI 147
           Q+Y+ Y+  + N+ ++H    Y + ++
Sbjct: 427 QYYVSYDFYKMNHPVYHKDPHYGFHNV 453


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 250 FHNSKLDNNFIL 215
           FHN   +N+FI+
Sbjct: 578 FHNMSFENDFII 589


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -1

Query: 259 IVMFHNSKLDNNFI-LCMKIRKTTIDY--FMPKMHIFMKALNVVR 134
           +V FH  KL NN       +++  +D+   +  MH +    ++VR
Sbjct: 71  VVSFHKLKLTNNISDKHGFLKEKAVDFLTILNSMHKYQPRFHLVR 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,120
Number of Sequences: 336
Number of extensions: 1826
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6579502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)