Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30574
         (337 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   0.77 
AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    24   1.8  
EF588503-1|ABQ96738.1|  169|Anopheles gambiae transposase protein.     22   7.1  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
            gambiae T1 retroposon. ).
          Length = 975

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 87   CYRLFTHYFYPTVISNST*NQFQN 16
            C+RLF H++Y     +S  N F+N
Sbjct: 945  CFRLFNHFYYLFDFDSSL-NSFRN 967


>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 179 EIINSCFPDFHT*YKIVI*FTIMEHNYYETNKFSF 283
           E+IN+    F     IV  F   +HNY++ N F +
Sbjct: 2   ELINAVLAAFIFAVSIVYLFIRNKHNYWKDNGFPY 36


>EF588503-1|ABQ96738.1|  169|Anopheles gambiae transposase protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 58  IKVMCKQSITLNHQFVKLNKNYII 129
           + ++CK+ +  N     LN NYI+
Sbjct: 113 LDLICKECLPFNLVVYTLNPNYIM 136


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 337,384
Number of Sequences: 2352
Number of extensions: 6092
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23774685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)