Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30574
         (337 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L06419-1|AAA60116.1|  727|Homo sapiens lysyl hydroxylase protein.      29   2.7  
BC016657-1|AAH16657.1|  727|Homo sapiens procollagen-lysine 1, 2...    29   2.7  
AL096840-6|CAC19722.1|  727|Homo sapiens procollagen-lysine 1, 2...    29   2.7  
AF490527-1|AAM12752.1|  727|Homo sapiens lysyl hydroxylase protein.    29   2.7  

>L06419-1|AAA60116.1|  727|Homo sapiens lysyl hydroxylase protein.
          Length = 727

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 253 MFHNSKLDNNFILCMKIRKTTIDYFMPKMH 164
           +FH+SKLD +   C  IR+  +  F+   H
Sbjct: 471 LFHHSKLDPDMAFCANIRQQDVFMFLTNRH 500


>BC016657-1|AAH16657.1|  727|Homo sapiens procollagen-lysine 1,
           2-oxoglutarate 5-dioxygenase 1 protein.
          Length = 727

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 253 MFHNSKLDNNFILCMKIRKTTIDYFMPKMH 164
           +FH+SKLD +   C  IR+  +  F+   H
Sbjct: 471 LFHHSKLDPDMAFCANIRQQDVFMFLTNRH 500


>AL096840-6|CAC19722.1|  727|Homo sapiens procollagen-lysine 1,
           2-oxoglutarate 5-dioxygenase 1 protein.
          Length = 727

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 253 MFHNSKLDNNFILCMKIRKTTIDYFMPKMH 164
           +FH+SKLD +   C  IR+  +  F+   H
Sbjct: 471 LFHHSKLDPDMAFCANIRQQDVFMFLTNRH 500


>AF490527-1|AAM12752.1|  727|Homo sapiens lysyl hydroxylase protein.
          Length = 727

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 253 MFHNSKLDNNFILCMKIRKTTIDYFMPKMH 164
           +FH+SKLD +   C  IR+  +  F+   H
Sbjct: 471 LFHHSKLDPDMAFCANIRQQDVFMFLTNRH 500


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,087,175
Number of Sequences: 237096
Number of extensions: 805543
Number of successful extensions: 810
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)