Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30574
         (337 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   4.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   5.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   5.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    20   7.0  
AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    20   9.2  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -1

Query: 238 KLDNNFILCMKIRKTTIDYFMPKMHIF 158
           K D  ++L   +   T+    PK+H+F
Sbjct: 132 KFDRLWVLDSGLVNRTVPVCAPKLHVF 158


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 76  QSITLNHQFVKLNKNY 123
           + + LNH +  LN NY
Sbjct: 224 EDVGLNHFYFMLNHNY 239


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 76  QSITLNHQFVKLNKNY 123
           + + LNH +  LN NY
Sbjct: 224 EDVGLNHFYFMLNHNY 239


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 238 KLDNNFILCMKIRKTTIDYFMPKMHIF 158
           K D  +IL   I   T     PK+H+F
Sbjct: 135 KFDRLWILDSGIINNTQPMCSPKLHVF 161


>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 204 IFIHNIKLLSNLLLWNITIMKQINLVS*NKKK 299
           + +HN+K L  L++ N     +I     +KK+
Sbjct: 76  VLVHNVKELEVLMMQNRKFCAEIAHGGSSKKR 107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,859
Number of Sequences: 438
Number of extensions: 1756
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)