Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30573
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0506 - 3677786-3677972,3678731-3679884                           40   9e-04
01_06_0157 + 27075179-27075529,27075849-27076043,27077705-270780...    29   1.7  
02_03_0069 - 14728968-14729368,14729434-14729800,14730099-14730149     28   3.9  
05_03_0308 - 12061871-12063205,12063340-12063671,12063974-12064052     28   5.1  
03_04_0196 - 18365840-18366701,18366875-18366950,18366989-183672...    27   8.9  
02_04_0335 + 22117902-22119869                                         27   8.9  
01_06_0772 - 31864564-31864653,31864733-31864816,31865547-318656...    27   8.9  
01_06_0595 - 30485460-30486097,30486721-30487179,30487339-304875...    27   8.9  

>02_01_0506 - 3677786-3677972,3678731-3679884
          Length = 446

 Score = 40.3 bits (90), Expect = 9e-04
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +3

Query: 57  PDDGRF--LAFDHVTFWVSNAKQAASYYVTRFGFEPLAYSGLETGSRQISSHAVRMNKII 230
           P   RF  LAF HV  W ++A  AA  +    G    A S L TG+   +S  +R   + 
Sbjct: 39  PRSDRFQALAFHHVELWCADAASAAGRFAFALGAPLAARSDLSTGNSAHASLLLRSASVA 98

Query: 231 FVFQAQY 251
           F+F A Y
Sbjct: 99  FLFTAPY 105


>01_06_0157 +
           27075179-27075529,27075849-27076043,27077705-27078036,
           27078157-27078577
          Length = 432

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 327 ENLDYILEYARKQGAKVVKDLWEEKDQYG 413
           + LD++L  ARK G KV+  L +  D +G
Sbjct: 117 KGLDFVLSEARKYGIKVILSLVDNYDSFG 145


>02_03_0069 - 14728968-14729368,14729434-14729800,14730099-14730149
          Length = 272

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -2

Query: 248 LRLKHEDYLIHSDGMRRNLSRTRLQTAVSQWLE 150
           LR  HED LI    M R +  T +Q  + QWLE
Sbjct: 33  LRPIHEDELIILFSMVRKIKVTPVQCMICQWLE 65


>05_03_0308 - 12061871-12063205,12063340-12063671,12063974-12064052
          Length = 581

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 210 RHETKSV*NPSPDR-CKPMARSQTSSRSNWPLVWRSKPKT 94
           R+  K + +P P +  + +A+ ++SS      VWR KPKT
Sbjct: 528 RYWRKPIKSPVPTKKLEQLAQKKSSSAPKSKKVWRKKPKT 567


>03_04_0196 -
           18365840-18366701,18366875-18366950,18366989-18367237,
           18367819-18367837
          Length = 401

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 248 LRLKHEDYLIHSDGMRRNLSRTRLQTAVSQWLE 150
           LRL  ED LI    M R +  + +Q  + QWLE
Sbjct: 144 LRLIREDELIILFSMVRKIKVSHVQCMIRQWLE 176


>02_04_0335 + 22117902-22119869
          Length = 655

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 19/70 (27%), Positives = 28/70 (40%)
 Frame = -2

Query: 236 HEDYLIHSDGMRRNLSRTRLQTAVSQWLEAKPRHVVTGRLFGVRNPKRDVVKSQETTIVR 57
           H D  +   G R   +R R+   +S   E +P   +T   FGV +     V +  TT   
Sbjct: 191 HTDNTVSGGGARHGHARRRVVRQLSPEPEPEPSATMTETSFGVSSDVVTTVTNPVTTQPA 250

Query: 56  LSALVRVSRH 27
            +A     RH
Sbjct: 251 AAAAQSQRRH 260


>01_06_0772 -
           31864564-31864653,31864733-31864816,31865547-31865603,
           31865700-31865828,31866704-31866790,31866856-31866933,
           31867150-31867306,31868000-31868141,31868835-31868986,
           31869118-31869371,31869819-31869896
          Length = 435

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 287 CDFVYEFGFHWLILRLKHEDY 225
           C F+Y  GF W IL LK + Y
Sbjct: 155 CYFLYIAGFVWFILTLKKKTY 175


>01_06_0595 - 30485460-30486097,30486721-30487179,30487339-30487558,
            30488229-30489980
          Length = 1022

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/44 (22%), Positives = 21/44 (47%)
 Frame = -2

Query: 239  KHEDYLIHSDGMRRNLSRTRLQTAVSQWLEAKPRHVVTGRLFGV 108
            KH       + +RR L + R  ++ + W+++ P  +  G +  V
Sbjct: 885  KHSPLSSGGENLRRRLKKDRASSSKTTWMQSDPHILTEGEIIEV 928


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,395,370
Number of Sequences: 37544
Number of extensions: 298816
Number of successful extensions: 859
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)