Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30573
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22057| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_23830| Best HMM Match : Glyoxalase (HMM E-Value=4.1e-08) 51 7e-07
SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0) 31 0.43
SB_22424| Best HMM Match : E-MAP-115 (HMM E-Value=5.5) 29 3.0
SB_22196| Best HMM Match : FtsJ (HMM E-Value=3.6e-25) 28 4.0
SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_59374| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 27 6.9
SB_46324| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 27 6.9
SB_44075| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10) 27 6.9
SB_19321| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 27 6.9
SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 27 6.9
SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_28422| Best HMM Match : TerC (HMM E-Value=4) 27 9.2
SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_37103| Best HMM Match : DUF164 (HMM E-Value=0.26) 27 9.2
SB_28072| Best HMM Match : VWA (HMM E-Value=0) 27 9.2
SB_11547| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.22) 27 9.2
>SB_22057| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 53.2 bits (122), Expect = 1e-07
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 297 DFVKDVAFQVENLDYILEYARKQGAKVVKDLWEEKDQYGVVRMATLKT-YGSNTHTLVDR 473
D VKD+A +VEN+ Y E G V++ D YG V + +++ G+ H+L++
Sbjct: 64 DTVKDIALEVENVSYATEIVAVNGGTVLEFTKVCDDCYGTVTSSMIRSPCGNVCHSLLNT 123
Query: 474 SKYTGPFLPGYQ 509
+KYTG FLPG++
Sbjct: 124 TKYTGLFLPGFK 135
>SB_23830| Best HMM Match : Glyoxalase (HMM E-Value=4.1e-08)
Length = 306
Score = 50.8 bits (116), Expect = 7e-07
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +3
Query: 291 HGDFVKDVAFQVENLDYILEYARKQGAKVVKDLWEEKDQYGVVRMATLKT 440
HGD VKD+AF+VE+ + + K+GA V++ WEE D G V MAT++T
Sbjct: 8 HGDGVKDIAFEVEDCVALYKECVKRGAVSVREPWEESDGNGSVTMATVQT 57
>SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0)
Length = 808
Score = 31.5 bits (68), Expect = 0.43
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 360 KQGAKVVKDLWEEKDQYGVVRMATLKT 440
K+GA V++ WEE D G V MAT++T
Sbjct: 598 KRGAVSVREPWEESDGNGSVTMATVQT 624
>SB_22424| Best HMM Match : E-MAP-115 (HMM E-Value=5.5)
Length = 139
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 110 VRNPKRDVVKSQETTIVRLSALVRVSR 30
V RDVV++QETTI RL A+ + ++
Sbjct: 15 VNKQLRDVVRAQETTIARLVAMCQSNK 41
>SB_22196| Best HMM Match : FtsJ (HMM E-Value=3.6e-25)
Length = 941
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 114 KQAASYYVTRFGFEPLA 164
KQAA YY+ +FG +P+A
Sbjct: 400 KQAAGYYMEKFGVQPIA 416
>SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 58 RTMVVSWLLTTSRFGFRTPNKRPVTT*RGLASS 156
R + V W + T FGF+ N T RG+ S+
Sbjct: 553 RALGVRWNVETDTFGFKVSNTEKADTMRGVLST 585
>SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 375 VVKDLWEEKDQYGVVRMATLKTYGSNTH 458
V+ DL E QYG++ L+ +G NT+
Sbjct: 66 VLHDLTTEGQQYGIILQQLLELHGQNTN 93
>SB_59374| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 266
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 58 RTMVVSWLLTTSRFGFRTPNKRPVTT*RGLASS 156
R + V W + T FGF+ N T RG+ S+
Sbjct: 32 RALGVRWNVETDTFGFKVSNTEKADTMRGVLST 64
>SB_46324| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 266
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 58 RTMVVSWLLTTSRFGFRTPNKRPVTT*RGLASS 156
R + V W + T FGF+ N T RG+ S+
Sbjct: 32 RALGVRWNVETDTFGFKVSNTEKADTMRGVLST 64
>SB_44075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 58 RTMVVSWLLTTSRFGFRTPNKRPVTT*RGLASS 156
R + V W + T FGF+ N T RG+ S+
Sbjct: 32 RALGVRWNVETDTFGFKVSNTEKADTMRGVLST 64
>SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10)
Length = 475
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 58 RTMVVSWLLTTSRFGFRTPNKRPVTT*RGLASS 156
R + V W + T FGF+ N T RG+ S+
Sbjct: 354 RALGVRWNVETDTFGFKVSNTEKADTMRGVLST 386
>SB_19321| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 780
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 58 RTMVVSWLLTTSRFGFRTPNKRPVTT*RGLASS 156
R + V W + T FGF+ N T RG+ S+
Sbjct: 201 RALGVRWNVETDTFGFKVSNTEKADTMRGVLST 233
>SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1244
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 58 RTMVVSWLLTTSRFGFRTPNKRPVTT*RGLASS 156
R + V W + T FGF+ N T RG+ S+
Sbjct: 870 RALGVRWNVETDTFGFKVSNTEKADTMRGVLST 902
>SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1515
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 58 RTMVVSWLLTTSRFGFRTPNKRPVTT*RGLASS 156
R + V W + T FGF+ N T RG+ S+
Sbjct: 1148 RALGVRWNVETDTFGFKVSNTEKADTMRGVLST 1180
>SB_28422| Best HMM Match : TerC (HMM E-Value=4)
Length = 465
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = -1
Query: 159 MARSQTSSRSNWPLVWRSKPKT*RGQKPRNDHRPAFCPCPCKSSFCIKNSIN 4
M R ++W L W PK R + HR P P ++C + +N
Sbjct: 292 MVRLFHVQHAHWALTWMEGPKRSRCMLTQRQHRKHSHPHPIWVTWCHRMVVN 343
>SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1913
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 42 DKGRKPDDGRFLAFDHVTFWVSNAKQAASYYVTRFGFEPLAYSGLETGSRQISSHAVR 215
D G R ++ H SNAK+AAS+ TR + LA S ++G Q + R
Sbjct: 17 DTGHPCKTAREMSRKHDPIHASNAKKAASHVDTRTTVQ-LAKSAKDSGKSQSETSVFR 73
>SB_37103| Best HMM Match : DUF164 (HMM E-Value=0.26)
Length = 387
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 291 HGDFVKDVAFQVENLDYILEYARKQGAKVVKDLWEEKDQYGVVRMAT--LKTYGSNTH 458
H +F+ +Q+E +I E + + LW+EKD++ + + A L+T+ +N H
Sbjct: 312 HHEFMLTEQYQLEKNSWIREIGLLK-----EQLWKEKDEHSLSKRALEHLRTHFANQH 364
>SB_28072| Best HMM Match : VWA (HMM E-Value=0)
Length = 2979
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = +3
Query: 240 QAQYEPMETEFVNEVAIHG-DFVKDVAFQVENLDYILEYARKQGAKVVKDLWEEKDQYGV 416
Q+Q P+ + + + DF D+ F V+N D++ + +K + +
Sbjct: 2787 QSQVLPLVKKLTEKTGLKSSDFAADILFLVDNSDFVTNEEFESQLDFIKSIARKMHISPE 2846
Query: 417 VRMATLKTYGSNTHTLVDRSKY 482
+ TY N +VD Y
Sbjct: 2847 GTRVGMITYNFNPKLIVDFESY 2868
>SB_11547| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.22)
Length = 432
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -2
Query: 461 SVSITAVRFQRSHSDNAVLIFFFPQILDDFRS-LFPCILQYVVQVFHLEGYVFH 303
S S+ + H + FP + D S LF + +Y+++ FH G + H
Sbjct: 78 STSLERYIIRTFHQSGKIHPPHFPPVWKDTSSALFTSLERYIIRTFHQSGKIHH 131
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,986,482
Number of Sequences: 59808
Number of extensions: 355989
Number of successful extensions: 880
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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