Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30570
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q383Z6 Cluster: Helicase-like protein; n=2; Trypanosoma...    34   2.2  
UniRef50_UPI00006CFA90 Cluster: phospholipid-translocating P-typ...    33   5.1  
UniRef50_UPI0000E48B81 Cluster: PREDICTED: similar to slingshot-...    32   8.9  

>UniRef50_Q383Z6 Cluster: Helicase-like protein; n=2;
           Trypanosoma|Rep: Helicase-like protein - Trypanosoma
           brucei
          Length = 1009

 Score = 33.9 bits (74), Expect = 2.2
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = -2

Query: 335 LIKGPSTFVIKPNKNVPQKNRNGGNSFPRSK 243
           +I+ PS FV+  +  +P+KNRNG +S P S+
Sbjct: 563 IIQKPSAFVLSISDPLPEKNRNGQDSVPSSE 593


>UniRef50_UPI00006CFA90 Cluster: phospholipid-translocating P-type
           ATPase, flippase family protein; n=1; Tetrahymena
           thermophila SB210|Rep: phospholipid-translocating P-type
           ATPase, flippase family protein - Tetrahymena
           thermophila SB210
          Length = 412

 Score = 32.7 bits (71), Expect = 5.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 204 PFGVSVFVILFTSSNHSSYSKLYDALTNSIKWCTKLI 94
           P  + +FVILF  +N+ S  + YD+  N    C KL+
Sbjct: 170 PLLLDIFVILFKEANYYSKQRKYDSQINDSNECQKLV 206


>UniRef50_UPI0000E48B81 Cluster: PREDICTED: similar to slingshot-2L;
           n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to slingshot-2L - Strongylocentrotus purpuratus
          Length = 1308

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 12/42 (28%), Positives = 26/42 (61%)
 Frame = -1

Query: 234 LMYLTLYSITPFGVSVFVILFTSSNHSSYSKLYDALTNSIKW 109
           L+ LT++ ++ F +S+  +L   ++ S Y K+  ++TN+  W
Sbjct: 156 LLSLTMHMVSVFVLSLIYVLQAKASISDYQKIISSVTNTYTW 197


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,739,939
Number of Sequences: 1657284
Number of extensions: 5803450
Number of successful extensions: 10819
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10813
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)