Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30570
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   0.70 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   0.92 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   4.9  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   4.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   4.9  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -1

Query: 228 YLTLYSITPFGVSVFVILFT 169
           Y+T YSI+ F V + V++FT
Sbjct: 203 YVTWYSISVFMVPLVVLIFT 222


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -2

Query: 320 STFVIKPNKNVPQK-NRNGGNSFPRSK 243
           +T +++ N+NVPQK   NG   FP S+
Sbjct: 735 ATSLVESNRNVPQKCIFNGQAYFPGSR 761


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 455 FNYPFLLFLTFFAI 496
           F +PFLL +TF ++
Sbjct: 199 FGWPFLLLITFTSL 212



 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 86  MLCINLVHHFIELVKASYNLE*EL 157
           +LC ++ H   EL+ A Y+L+ EL
Sbjct: 251 LLCDSVAHTAGELLGAVYSLDLEL 274


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 455 FNYPFLLFLTFFAI 496
           F +PFLL +TF ++
Sbjct: 199 FGWPFLLLITFTSL 212



 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 86  MLCINLVHHFIELVKASYNLE*EL 157
           +LC ++ H   EL+ A Y+L+ EL
Sbjct: 251 LLCDSVAHTAGELLGAVYSLDLEL 274


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 455 FNYPFLLFLTFFAI 496
           F +PFLL +TF ++
Sbjct: 519 FGWPFLLLITFTSL 532



 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 86  MLCINLVHHFIELVKASYNLE*EL 157
           +LC ++ H   EL+ A Y+L+ EL
Sbjct: 571 LLCDSVAHTAGELLGAVYSLDLEL 594


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,060
Number of Sequences: 336
Number of extensions: 1710
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)