Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30570
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83217-6|CAD59136.1|  128|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AF000299-5|AAC47977.1|  335|Caenorhabditis elegans Hypothetical ...    28   3.4  
Z71185-2|CAA94904.2|  522|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>Z83217-6|CAD59136.1|  128|Caenorhabditis elegans Hypothetical
           protein C10C6.7a protein.
          Length = 128

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -1

Query: 210 ITPFGVSVFVILFTSSNHSSYSKLYDALTNSIKWCTKLIH 91
           I P G+ +F+I  TS N S+Y        +S+ WC+ +++
Sbjct: 90  IHPNGIKMFIISSTSDNFSNYFNCNS--NSSLCWCSHVLY 127


>AF000299-5|AAC47977.1|  335|Caenorhabditis elegans Hypothetical
           protein E03H12.3 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 291 VFIRFYYERTRSLY*FLVFCYF 356
           +F+ FY++ T +L  F  FC+F
Sbjct: 15  IFLHFYFDETSALSMFFSFCFF 36


>Z71185-2|CAA94904.2|  522|Caenorhabditis elegans Hypothetical
           protein C35A5.2 protein.
          Length = 522

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 210 ITPFGVSVFVILFTSSNHSSYSKLYDALTNS 118
           + PF   VF  L+  S+H   +K+ D LT++
Sbjct: 16  VQPFNYLVFCPLYAHSHHKFLAKIADTLTDA 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,941,224
Number of Sequences: 27780
Number of extensions: 148913
Number of successful extensions: 313
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 313
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)