Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30567
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 360 e-100
SB_56| Best HMM Match : Actin (HMM E-Value=0) 360 e-100
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 360 e-100
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 359 e-100
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 266 7e-72
SB_54| Best HMM Match : Actin (HMM E-Value=0) 203 6e-53
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 201 3e-52
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 193 8e-50
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 183 9e-47
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 171 3e-43
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 105 2e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 69 3e-12
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 63 1e-10
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 44 6e-05
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5) 32 0.24
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.74
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.98
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 1.3
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 29 2.3
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 3.0
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6) 28 5.3
SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7) 27 6.9
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 27 9.2
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 27 9.2
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 360 bits (885), Expect = e-100
Identities = 168/171 (98%), Positives = 171/171 (100%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 181
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 44 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 103
Query: 182 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 361
LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTV
Sbjct: 104 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTV 163
Query: 362 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE
Sbjct: 164 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 214
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 360 bits (885), Expect = e-100
Identities = 168/171 (98%), Positives = 171/171 (100%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 181
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 44 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 103
Query: 182 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 361
LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTV
Sbjct: 104 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTV 163
Query: 362 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE
Sbjct: 164 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 214
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 360 bits (885), Expect = e-100
Identities = 168/171 (98%), Positives = 171/171 (100%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 181
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 45 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 104
Query: 182 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 361
LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTV
Sbjct: 105 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTV 164
Query: 362 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 215
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 359 bits (883), Expect = e-100
Identities = 167/171 (97%), Positives = 171/171 (100%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 181
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 45 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 104
Query: 182 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 361
LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTV
Sbjct: 105 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTV 164
Query: 362 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
PIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE
Sbjct: 165 PIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 215
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 266 bits (652), Expect = 7e-72
Identities = 124/129 (96%), Positives = 127/129 (98%), Gaps = 2/129 (1%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 181
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 45 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 104
Query: 182 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 361
LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTV
Sbjct: 105 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTV 164
Query: 362 PIYE--GYA 382
PIYE GY+
Sbjct: 165 PIYEERGYS 173
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 203 bits (496), Expect = 6e-53
Identities = 91/131 (69%), Positives = 112/131 (85%)
Frame = +2
Query: 122 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 301
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 302 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 481
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 482 AEREIVRDIKE 514
AE++I+RD+KE
Sbjct: 2249 AEQQIIRDLKE 2259
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 201 bits (490), Expect = 3e-52
Identities = 90/166 (54%), Positives = 122/166 (73%), Gaps = 1/166 (0%)
Frame = +2
Query: 20 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 196
KD VGDEA R +L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 197 PLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 376
PLNP NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG
Sbjct: 113 PLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEG 172
Query: 377 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
+ALPH RLD+AGRD+T YL+K++ RGY+F TA+ E VR +KE
Sbjct: 173 FALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKE 218
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 193 bits (470), Expect = 8e-50
Identities = 92/100 (92%), Positives = 97/100 (97%)
Frame = +2
Query: 215 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 394
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 395 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 177
Score = 97.1 bits (231), Expect = 8e-21
Identities = 43/47 (91%), Positives = 44/47 (93%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 142
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 44 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 183 bits (445), Expect = 9e-47
Identities = 86/93 (92%), Positives = 90/93 (96%)
Frame = +2
Query: 236 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 415
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 416 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKE
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKE 93
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 171 bits (416), Expect = 3e-43
Identities = 74/115 (64%), Positives = 100/115 (86%)
Frame = +2
Query: 170 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 349
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 350 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKE 240
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 105 bits (253), Expect = 2e-23
Identities = 48/126 (38%), Positives = 80/126 (63%)
Frame = +2
Query: 80 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 259
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 260 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 439
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 440 MKILTE 457
++ E
Sbjct: 123 RQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 68.5 bits (160), Expect = 3e-12
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +2
Query: 281 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 457
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 458 RGYSFTTTAEREIVRDIKE 514
RG++FT+++ +IV DIKE
Sbjct: 827 RGHNFTSSSGWQIVNDIKE 845
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 63.3 bits (147), Expect = 1e-10
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Frame = +2
Query: 275 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 430
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 431 DYLMKILTERGYSFTTTAEREIVRDIKE 514
++ ++L ER E + IKE
Sbjct: 100 FFVQQLLREREMGIPPEQSMETAKTIKE 127
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +2
Query: 8 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 187
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.24
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 317 TGIVLDSGDGVSHTVPI 367
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 44.4 bits (100), Expect = 6e-05
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Frame = +2
Query: 29 YVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 202
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE----------------- 315
Query: 203 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVP 364
+ M +I+FE +N A+ A LS Y S +V+D+G +H VP
Sbjct: 316 ---GLEDAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVP 372
Query: 365 IYEGYALPHAILR 403
++ G + A+ R
Sbjct: 373 VFNGKVIKKAVRR 385
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 125 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 304
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 305 SGRTTGIV 328
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5)
Length = 257
Score = 32.3 bits (70), Expect = 0.24
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -3
Query: 493 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGV----GDTISGVEH 326
F +SG + D H++ + +TS V+ + G + D + T S E
Sbjct: 134 FGISGTANTEEQIDVDKHQITNKASTSSVEKANTAGTTGGTQDQHATQGNKASTCSFEEA 193
Query: 325 DTGGTTGGVQ 296
+T GTTGG Q
Sbjct: 194 NTAGTTGGTQ 203
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 71 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 223
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 0.74
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 212 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 328
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 0.98
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -3
Query: 457 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVEHDTGG 314
L E + +V Q + GV S G+G G TISG D+GG
Sbjct: 1474 LQEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGG 1521
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -3
Query: 232 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 53
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 52 AL 47
++
Sbjct: 214 SV 215
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -1
Query: 417 PAKSRRRMAWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNM 238
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 237 IWVIFSLLALGLR 199
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 29.1 bits (62), Expect = 2.3
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -1
Query: 357 VWE--TPSPESSTIPVVRPE-------AYSESTAWMATYMAGELKVSNMIWVIFSLLALG 205
VWE T P + T+P + + Y S +W+ L N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 204 LRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMIPCSMGYFRVRIPLLLWAS 40
L A + T C T +L ++ ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 400 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 302
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 215 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 364
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 200 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 328
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6)
Length = 188
Score = 27.9 bits (59), Expect = 5.3
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -1
Query: 366 MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELK-VSNMIWVIFSLLALGLRGAS 190
M + + PSP P+A+ + A Y +G LK S V + L+ G G
Sbjct: 1 MAELADLPSPRMDWSSTDLPQAFKKFRATCELYFSGPLKEKSEPDKVSYLLIWTGDEGIE 60
Query: 189 VSSTGCSSGATRSSL*KVW 133
+SST S L W
Sbjct: 61 LSSTWALSADDSKKLDTYW 79
>SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = -1
Query: 291 STAWMATYMAGELKVSNMIWV---IFSLLALGL 202
S AW+ + + EL+ S +WV IFS+L +G+
Sbjct: 163 SVAWLCSLLYLELEASLYVWVPSLIFSILIIGV 195
>SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 590
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +1
Query: 343 WCLPHRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS 501
WC H+ R PR P G WS PH++ + L H H G S
Sbjct: 352 WCAKHQ---ERSHQQPRQPDQGQSWS-----PHKE-YNVTFLHHRHHPTGQSS 395
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3
Query: 505 VTNDFPLSGGGE-RVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVE 329
V++D + E RV+ G + +G+V+ +DGVG+ D GVGD +G
Sbjct: 88 VSDDGGVGDNAEGRVSDDGGVGDDAIGRVSDDGGVGDDGVGR---VSDNGGVGDDANGRV 144
Query: 328 HDTGG 314
D GG
Sbjct: 145 SDDGG 149
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 351 PTPYPSTKVTLCPTPSSVW 407
PTP+P+T V +P S+W
Sbjct: 1373 PTPFPTTPVPPTTSPPSIW 1391
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,057,462
Number of Sequences: 59808
Number of extensions: 302131
Number of successful extensions: 1089
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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