Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30567
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 356 6e-99
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 354 2e-98
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 354 2e-98
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 353 3e-98
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 353 3e-98
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 351 2e-97
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 351 2e-97
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 351 2e-97
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 351 2e-97
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 321 2e-88
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 291 2e-79
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 287 4e-78
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 197 3e-51
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 152 2e-37
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 130 5e-31
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 93 1e-19
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 91 3e-19
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 70 1e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 68 4e-12
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 48 3e-06
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 48 3e-06
At5g43500.2 68418.m05318 expressed protein 36 0.021
At5g43500.1 68418.m05319 expressed protein 36 0.021
At3g24130.1 68416.m03030 pectinesterase family protein contains ... 29 1.9
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 1.9
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 29 1.9
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 1.9
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 1.9
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 29 2.5
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 29 2.5
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 28 4.3
At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1 (... 27 5.7
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 27 7.5
At3g15400.1 68416.m01954 anther development protein, putative si... 27 7.5
At2g39480.1 68415.m04845 ABC transporter family protein related ... 27 7.5
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 7.5
At3g28790.1 68416.m03593 expressed protein 27 9.9
At1g69670.1 68414.m08018 cullin, putative contains similarity to... 27 9.9
At1g26830.1 68414.m03270 cullin, putative similar to Cullin homo... 27 9.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 356 bits (875), Expect = 6e-99
Identities = 165/171 (96%), Positives = 171/171 (100%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 181
MVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 46 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 105
Query: 182 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 361
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 362 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT+AEREIVRD+KE
Sbjct: 166 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKE 216
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 354 bits (871), Expect = 2e-98
Identities = 165/171 (96%), Positives = 170/171 (99%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 181
MVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 46 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPV 105
Query: 182 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 361
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 362 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
PIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+KE
Sbjct: 166 PIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKE 216
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 354 bits (871), Expect = 2e-98
Identities = 165/171 (96%), Positives = 170/171 (99%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 181
MVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 46 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPV 105
Query: 182 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 361
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 362 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
PIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+KE
Sbjct: 166 PIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKE 216
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 353 bits (869), Expect = 3e-98
Identities = 165/171 (96%), Positives = 169/171 (98%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 181
MVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+
Sbjct: 46 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPI 105
Query: 182 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 361
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 362 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
PIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIKE
Sbjct: 166 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKE 216
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 353 bits (869), Expect = 3e-98
Identities = 165/171 (96%), Positives = 169/171 (98%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 181
MVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+
Sbjct: 46 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPI 105
Query: 182 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 361
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 362 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
PIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIKE
Sbjct: 166 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKE 216
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 351 bits (863), Expect = 2e-97
Identities = 165/171 (96%), Positives = 168/171 (98%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 181
MVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 46 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPV 105
Query: 182 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 361
LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 362 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
PIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRDIKE
Sbjct: 166 PIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKE 216
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 351 bits (863), Expect = 2e-97
Identities = 162/171 (94%), Positives = 169/171 (98%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 181
MVGM QKD+YVGDEAQSKRGILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPV
Sbjct: 46 MVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPV 105
Query: 182 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 361
LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 362 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
PIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKE
Sbjct: 166 PIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKE 216
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 351 bits (863), Expect = 2e-97
Identities = 162/171 (94%), Positives = 169/171 (98%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 181
MVGM QKD+YVGDEAQSKRGILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPV
Sbjct: 46 MVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPV 105
Query: 182 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 361
LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 362 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
PIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKE
Sbjct: 166 PIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKE 216
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 351 bits (863), Expect = 2e-97
Identities = 162/171 (94%), Positives = 169/171 (98%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 181
MVGM QKD+YVGDEAQSKRGILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPV
Sbjct: 46 MVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPV 105
Query: 182 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 361
LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165
Query: 362 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
PIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKE
Sbjct: 166 PIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKE 216
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 321 bits (788), Expect = 2e-88
Identities = 143/171 (83%), Positives = 163/171 (95%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 181
MVGM +KD++VGDEAQ++RGIL+LKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHP+
Sbjct: 47 MVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPI 106
Query: 182 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 361
LLTEAPLNPK NREKMTQIMFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGVSHTV
Sbjct: 107 LLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTV 166
Query: 362 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
PIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++TT+AEREIVRDIKE
Sbjct: 167 PIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIVRDIKE 217
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 291 bits (713), Expect = 2e-79
Identities = 130/169 (76%), Positives = 152/169 (89%)
Frame = +2
Query: 8 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 187
G+ +SYVG+E + R ILTLK P+EHGI+ NWDDMEKIWH+TFYNELRV PEEHPVLL
Sbjct: 37 GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLL 96
Query: 188 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 367
TEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+
Sbjct: 97 TEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPV 156
Query: 368 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
YEGYALPH ILRLDL GRDLTDYL++I+TERGY++TT+AEREIVRDIKE
Sbjct: 157 YEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIVRDIKE 205
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 287 bits (703), Expect = 4e-78
Identities = 132/171 (77%), Positives = 154/171 (90%)
Frame = +2
Query: 2 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 181
MVGM + D +VGD+A+++ GILTL YP+EHG+++NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 182 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 361
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ V
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIV 120
Query: 362 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
PIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY T+AERE+VRDIKE
Sbjct: 121 PIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TSAEREVVRDIKE 168
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 197 bits (481), Expect = 3e-51
Identities = 84/165 (50%), Positives = 117/165 (70%)
Frame = +2
Query: 20 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 199
KD VG+ R L + YP+ +GI+ NWDDME +W H FYNEL++ P + +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 200 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 379
LNP NREKM + MFE +N +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY
Sbjct: 111 LNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGY 170
Query: 380 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
+ PH R+++AGR +T YL+ +L+ RGY+ TA+ E VR+IKE
Sbjct: 171 SFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETVREIKE 215
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 152 bits (368), Expect = 2e-37
Identities = 74/172 (43%), Positives = 108/172 (62%), Gaps = 8/172 (4%)
Frame = +2
Query: 23 DSYVGDEAQSK-RGILT--LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 193
D Y+GDEA +K R T L YPIEHG + +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 194 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHT 358
+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG +H
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHV 186
Query: 359 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
VP+ EGY + I + +AG+D+T ++ +++ ERG + ++ R +KE
Sbjct: 187 VPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKE 238
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 130 bits (314), Expect = 5e-31
Identities = 60/146 (41%), Positives = 93/146 (63%), Gaps = 1/146 (0%)
Frame = +2
Query: 29 YVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 205
YVG +A S +R + + PI+ GI+++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 206 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 385
+ REK ++MFE + PA+++A VL+ +A+GR T +V+D G G + P+++GY L
Sbjct: 136 TQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVL 195
Query: 386 PHAILRLDLAGRDLTDYLMKILTERG 463
A++ L G LTD L+K L +G
Sbjct: 196 QKAVVSSPLGGEFLTDCLLKSLESKG 221
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 92.7 bits (220), Expect = 1e-19
Identities = 50/118 (42%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = +2
Query: 80 PIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 256
PIE G+I +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 257 SPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 430
Y + QAVLSLYA GR +G +D G G P+ EG A R +L G +LT
Sbjct: 117 VSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELT 174
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 91.5 bits (217), Expect = 3e-19
Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 10/158 (6%)
Frame = +2
Query: 71 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 250
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 251 FNSPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAIL 400
F ++Y+A Q+++ LY + R +V+D G +H VP+ + L HAI
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIK 180
Query: 401 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 514
R+DL G+ T+YL ++++ R S E +V D KE
Sbjct: 181 RIDLGGKAFTNYLKELVSYR--SINVMDETFLVDDAKE 216
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 69.7 bits (163), Expect = 1e-12
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Frame = +2
Query: 80 PIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 256
P + ++ ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 257 SPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 421
PA+ + A S L+ + GIVL G +H++P +G + R ++ G
Sbjct: 145 VPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGY 204
Query: 422 DLTDYLMKILT 454
+TDYL ++L+
Sbjct: 205 HVTDYLKQLLS 215
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 67.7 bits (158), Expect = 4e-12
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 14 GQKDSYVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 190
G++ Y G +A + +R + + P + GI+T+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 191 EAPLNPKANREK 226
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 48.4 bits (110), Expect = 3e-06
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Frame = +2
Query: 137 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 286
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 287 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 463
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 464 YSFTTTAEREIVRDIKE 514
SF + VR +KE
Sbjct: 301 ISFQSL---YTVRTLKE 314
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 48.4 bits (110), Expect = 3e-06
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Frame = +2
Query: 137 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 286
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 287 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 463
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 464 YSFTTTAEREIVRDIKE 514
SF + VR +KE
Sbjct: 301 ISFQSL---YTVRTLKE 314
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 35.5 bits (78), Expect = 0.021
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +2
Query: 173 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 352
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 238 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 296
Query: 353 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 448
V + +G +LP+ L G D+ L+ I
Sbjct: 297 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 35.5 bits (78), Expect = 0.021
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +2
Query: 173 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 352
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 250 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 308
Query: 353 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 448
V + +G +LP+ L G D+ L+ I
Sbjct: 309 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At3g24130.1 68416.m03030 pectinesterase family protein contains
Pfam profile: PF01095 Pectinesterase
Length = 335
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 487 LSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 359
L G G+R+T + D H V Q T ++ V +S+TF + Y
Sbjct: 86 LVGAGKRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSY 128
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 232 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPD 125
G+ + VG+G+ GG G+ GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 244 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 119
+HDL GHLL P+G+ EG E G DT+ + GV D +
Sbjct: 760 EHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYM 804
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 38 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 217
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 218 REK 226
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 38 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 217
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 218 REK 226
REK
Sbjct: 225 REK 227
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 355 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 471
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 355 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 471
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -1
Query: 375 PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATY-MAGELKVSNMIWVIFSLLALGLR 199
PS + V ++PS S +PVV + S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 198 GASVSST---GCSSGAT 157
G +VS G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1
(PLDALPHA1) (PLD1) / choline phosphatase 1 identical to
SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4)
(AtPLDalpha1) (PLD alpha 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
(PLDalpha) [Arabidopsis thaliana]
Length = 810
Score = 27.5 bits (58), Expect = 5.7
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -3
Query: 244 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 119
+HDL GHLL P+G+ EG E G DT+ + G D L
Sbjct: 760 EHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYL 804
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/80 (22%), Positives = 32/80 (40%)
Frame = +2
Query: 104 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 283
NW +E + + + P LL EA + PK+ E Q +++TF + + +
Sbjct: 494 NWSYIEFVDNKDVLELIEKKPGGVIALLDEACMFPKSTHETFAQKLYQTFKNYKRFTKPK 553
Query: 284 AVLSLYASGRTTGIVLDSGD 343
+ +A G V D
Sbjct: 554 LSRTSFAISHYAGEVTYQAD 573
>At3g15400.1 68416.m01954 anther development protein, putative
similar to anther development protein ATA20 GB:AAC50042
GI:2708813 from [Arabidopsis thaliana]
Length = 416
Score = 27.1 bits (57), Expect = 7.5
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Frame = -3
Query: 484 SGGGERVTPLGEDLHEVVGQVATSQVQTEDG--VGQSVTFVDGYGVGDTISGVEHDTG-G 314
S GE P + + + Q S+++ ED + + + G G G SGV + G G
Sbjct: 166 SMSGESKHPEHKVKPDQIMQTMASELEEEDPDHTSKPMGYGVGRGYGSGGSGVGYGVGIG 225
Query: 313 TTGGVQRXXXXXXXXXXXXXXXLKHDLGHLLPVGLGVEGGFGEQHGVLLGGDTQL-IVEG 137
++GG + G G+G GG G G+ GG T + I EG
Sbjct: 226 SSGGSGFGEGIGSSGGNGFGEGIGSSGGSGFGEGIGSSGGSGFGEGIGSGGGTGIGIGEG 285
Query: 136 V 134
+
Sbjct: 286 I 286
>At2g39480.1 68415.m04845 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1407
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 308 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 451
G+T +V SG G S + + E Y P A L L GRDL Y ++ L
Sbjct: 1186 GQTVAVVGVSGSGKSTIISLIERYYDPVAGQVL-LDGRDLKSYNLRWL 1232
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 104 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 253
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 348 SPTPYPSTKVTLCPTPSS 401
SPTP PST PTPS+
Sbjct: 278 SPTPTPSTPTPSTPTPST 295
>At1g69670.1 68414.m08018 cullin, putative contains similarity to
Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from
[Homo sapiens]; contains Pfam profile PF00888: Cullin
family
Length = 732
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +2
Query: 365 IYEGYALPHAILRLDLAGRDLTD-----YLMKILTERGYSFTTTAE 487
++E Y H RL L+G+ ++D ++K+ TE GY FT+ E
Sbjct: 418 VFEKYYKQHLAKRL-LSGKTVSDDAERNLIVKLKTECGYQFTSKLE 462
>At1g26830.1 68414.m03270 cullin, putative similar to Cullin homolog
3 (CUL-3) SP:Q13618, GI:3639052 from [Homo sapiens];
contains Pfam profile PF00888: Cullin family
Length = 732
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +2
Query: 365 IYEGYALPHAILRLDLAGRDLTD-----YLMKILTERGYSFTTTAE 487
++E Y H RL L+G+ ++D ++K+ TE GY FT+ E
Sbjct: 418 VFEKYYKQHLAKRL-LSGKTVSDDAERSLIVKLKTECGYQFTSKLE 462
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,621,765
Number of Sequences: 28952
Number of extensions: 211719
Number of successful extensions: 810
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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