Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30566
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   2.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.6  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 131 WVCPCDGGSRSINHQDFYYLPFYS 60
           W+C     + S   ++FYYLP  S
Sbjct: 49  WICALVNYNVSEISENFYYLPAMS 72


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -3

Query: 121 LATEDRGR*IIRTFIICHFIQNLLLESKNY 32
           LA +   + ++ T +   F+QNL+L+   Y
Sbjct: 149 LAVKTTSKSLVPTPVTHIFLQNLILKENTY 178


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 435  VLLAIYSKYT*SRTSWRLTVRSIVTTP 515
            +LL IYS +  +  SW     ++V  P
Sbjct: 1017 LLLVIYSVFNMNNVSWGTREVTVVPKP 1043


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 435  VLLAIYSKYT*SRTSWRLTVRSIVTTP 515
            +LL IYS +  +  SW     ++V  P
Sbjct: 1017 LLLVIYSVFNMNNVSWGTREVTVVPKP 1043


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,161
Number of Sequences: 336
Number of extensions: 2496
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)