Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30566
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM0288...   233   1e-61
AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional...   233   1e-61
AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,...   233   1e-61
AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic ...   219   2e-57
AE014298-1761|AAN09307.1|  618|Drosophila melanogaster CG32651-P...    30   1.6  
BT016123-1|AAV37008.1|  591|Drosophila melanogaster LD01328p pro...    28   6.5  
AY268068-1|AAQ56704.1|  591|Drosophila melanogaster UDP-GalNAc:p...    28   6.5  
AF493067-1|AAM62412.1|  591|Drosophila melanogaster UDP-N-acetyl...    28   6.5  
AE014298-2730|AAN09470.1|  591|Drosophila melanogaster CG6394-PB...    28   6.5  
AE014298-2729|AAF48851.1|  591|Drosophila melanogaster CG6394-PA...    28   6.5  

>AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM02885
           protein.
          Length = 801

 Score =  233 bits (570), Expect = 1e-61
 Identities = 111/148 (75%), Positives = 125/148 (84%)
 Frame = +2

Query: 68  MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 247
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query: 248 RRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDS 427
           RRKETVCIVLSDD CPDEKIRM            SDVVS+  CP VKYGKRV ILPID+S
Sbjct: 60  RRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDES 119

Query: 428 VEGLTGNLFEVYLKPYFMEAYRPIHRDD 511
            EG+TGNLFE+YLKPYF+EAYRPIH  D
Sbjct: 120 TEGVTGNLFEIYLKPYFLEAYRPIHMGD 147


>AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional
           endoplasmic reticulumATPase TER94 protein.
          Length = 801

 Score =  233 bits (570), Expect = 1e-61
 Identities = 111/148 (75%), Positives = 125/148 (84%)
 Frame = +2

Query: 68  MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 247
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query: 248 RRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDS 427
           RRKETVCIVLSDD CPDEKIRM            SDVVS+  CP VKYGKRV ILPID+S
Sbjct: 60  RRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDES 119

Query: 428 VEGLTGNLFEVYLKPYFMEAYRPIHRDD 511
            EG+TGNLFE+YLKPYF+EAYRPIH  D
Sbjct: 120 TEGVTGNLFEIYLKPYFLEAYRPIHMGD 147


>AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,
           isoform A protein.
          Length = 801

 Score =  233 bits (570), Expect = 1e-61
 Identities = 111/148 (75%), Positives = 125/148 (84%)
 Frame = +2

Query: 68  MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 247
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query: 248 RRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDS 427
           RRKETVCIVLSDD CPDEKIRM            SDVVS+  CP VKYGKRV ILPID+S
Sbjct: 60  RRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDES 119

Query: 428 VEGLTGNLFEVYLKPYFMEAYRPIHRDD 511
            EG+TGNLFE+YLKPYF+EAYRPIH  D
Sbjct: 120 TEGVTGNLFEIYLKPYFLEAYRPIHMGD 147


>AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic
           reticulum membranefusion protein protein.
          Length = 799

 Score =  219 bits (535), Expect = 2e-57
 Identities = 106/148 (71%), Positives = 119/148 (80%)
 Frame = +2

Query: 68  MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 247
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query: 248 RRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDS 427
           RRKETVCIVLSDD CPDEKIRM            SDVVS+  CP VKYGKRV ILPID+S
Sbjct: 60  RRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDES 119

Query: 428 VEGLTGNLFEVYLKPYFMEAYRPIHRDD 511
            EG+TGNLFE+YLKPYF      IH  D
Sbjct: 120 TEGVTGNLFEIYLKPYFPRGLSAIHMGD 147


>AE014298-1761|AAN09307.1|  618|Drosophila melanogaster CG32651-PA
           protein.
          Length = 618

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 21/70 (30%), Positives = 31/70 (44%)
 Frame = +3

Query: 252 ARKPFASCSQMIIALMRKFG*TVS*ETTFVCVFLMWYP*LRVLQ*NMENESTYCQLMIQL 431
           A+ P  +C + +      F  T+      V    +  P    L  N+ NES  C  +IQL
Sbjct: 434 AKCPDQNCQESLFMYNISFHLTIKHNNWLVKHLELNTPYTFQLDLNVTNESVKCHAVIQL 493

Query: 432 RVLLAIYSKY 461
           + +L  YSKY
Sbjct: 494 QNVLLEYSKY 503


>BT016123-1|AAV37008.1|  591|Drosophila melanogaster LD01328p
           protein.
          Length = 591

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -2

Query: 419 QLAVCGLVFHISLKDTELWIPHQKDAHEGCFSRHGSSEFSHQ 294
           +LA+C LV    L     W  H K   E   +R G  +F+HQ
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ 54


>AY268068-1|AAQ56704.1|  591|Drosophila melanogaster
           UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase
           protein.
          Length = 591

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -2

Query: 419 QLAVCGLVFHISLKDTELWIPHQKDAHEGCFSRHGSSEFSHQ 294
           +LA+C LV    L     W  H K   E   +R G  +F+HQ
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ 54


>AF493067-1|AAM62412.1|  591|Drosophila melanogaster
           UDP-N-acetylgalactosamine:
           polypeptideN-acetylgalactosaminyltransferase 2 protein.
          Length = 591

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -2

Query: 419 QLAVCGLVFHISLKDTELWIPHQKDAHEGCFSRHGSSEFSHQ 294
           +LA+C LV    L     W  H K   E   +R G  +F+HQ
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ 54


>AE014298-2730|AAN09470.1|  591|Drosophila melanogaster CG6394-PB,
           isoform B protein.
          Length = 591

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -2

Query: 419 QLAVCGLVFHISLKDTELWIPHQKDAHEGCFSRHGSSEFSHQ 294
           +LA+C LV    L     W  H K   E   +R G  +F+HQ
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ 54


>AE014298-2729|AAF48851.1|  591|Drosophila melanogaster CG6394-PA,
           isoform A protein.
          Length = 591

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -2

Query: 419 QLAVCGLVFHISLKDTELWIPHQKDAHEGCFSRHGSSEFSHQ 294
           +LA+C LV    L     W  H K   E   +R G  +F+HQ
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ 54


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,355,491
Number of Sequences: 53049
Number of extensions: 468624
Number of successful extensions: 1179
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1179
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)