Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30564
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.23 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.70 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   4.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   6.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 16/57 (28%), Positives = 21/57 (36%)
 Frame = +1

Query: 118  SRTRSVWTSSPTN*KRPVFSPRTLTENPTRFRENWPSLKTNSKSPKTVSSLVTLRSQ 288
            S T S W ++ T  +     P T +        NWP+  T    P  V   V   SQ
Sbjct: 1045 STTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPEVDKPSQ 1101


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +3

Query: 6    TSXKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKE 164
            TS K++E  G    K    ++   EN+   K+      +DE+     +N  KE
Sbjct: 853  TSDKAQEADGEVVVKKEVDEEERLENHTSVKIKREAEDRDEDERSFHSNGAKE 905


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 316 PTTFNSSSSSEILASPD 266
           P  F ++SSS  L SPD
Sbjct: 216 PAEFPTTSSSSALESPD 232


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 352 FSSDTSRDLRELPTTFNS 299
           F  D  RDL E+  +FNS
Sbjct: 86  FQGDIHRDLTEVYFSFNS 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,627
Number of Sequences: 336
Number of extensions: 1333
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)