Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30563
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024843-9|AAF60836.1|  263|Caenorhabditis elegans Hypothetical ...    31   0.37 
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    29   2.6  
AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical...    28   3.4  
U58753-5|AAC24434.2|  348|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z70203-2|CAA94105.1|  685|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin...    27   6.0  
Z68134-3|CAA92225.1|   97|Caenorhabditis elegans Hypothetical pr...    27   8.0  
U00036-9|AAK29852.1|  377|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ...    27   8.0  

>AC024843-9|AAF60836.1|  263|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.9 protein.
          Length = 263

 Score = 31.5 bits (68), Expect = 0.37
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -3

Query: 361 ASPSRPAEIMPLSQRTQKPRYSPPLRIPGLSISTLSGLVLFFLMTLLAFPQPP 203
           A+PS P  I     +T+KP  S P +I   S +  +  +  F  TL + P  P
Sbjct: 186 ANPSLPVHIQTFRVKTRKPVLSRPTKIRFSSEADRNSFIFSFSKTLRSLPDRP 238


>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
           protein F21E9.1 protein.
          Length = 1170

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 18/63 (28%), Positives = 35/63 (55%)
 Frame = -2

Query: 365 NSFTLASSGDNAAIPTNPKTTIFPSVKNSGAFNFNLIGLGSIFPDDALSVSPASNHHLIH 186
           +S  L+S   N +  + P+T+    +  S +F+F+L       P  +L +SP  ++H+IH
Sbjct: 261 SSLLLSSINSNLSHNSIPQTSP-KRISQSSSFSFSL-------PPSSLPLSPKIDNHVIH 312

Query: 185 RIR 177
           +I+
Sbjct: 313 KIK 315


>AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical
           protein F32D1.7 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 400 GKGSGSDQDMNGIASPSRPAEIMPLSQRTQKPRYSP 293
           G GSGS  D +G + P+R +  +P +     PR  P
Sbjct: 159 GSGSGSGNDSSGSSGPTRMSGQVPSTSGPPPPRPPP 194


>U58753-5|AAC24434.2|  348|Caenorhabditis elegans Hypothetical
           protein W03B1.6 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -3

Query: 103 ETGKNWY*RLSSVATSMTLAMIVV 32
           ET + WY +LSS +T+M +A++ V
Sbjct: 15  ETFEKWYLKLSSTSTAMLIAILFV 38


>Z70203-2|CAA94105.1|  685|Caenorhabditis elegans Hypothetical
           protein C05G5.2 protein.
          Length = 685

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 19/70 (27%), Positives = 28/70 (40%)
 Frame = -2

Query: 488 PVRSIEFRSIFDFPGACGTPACADSDVVNWERFGIRPGYEWNSFTLASSGDNAAIPTNPK 309
           P+  +      D P    TP    + V+    F  +P  +       S  D  ++PT PK
Sbjct: 513 PIEPVVVPKAVDIPAPKPTPVTNTTAVIPKVEFK-KPAAKSLFDDSDSDSDLFSLPTKPK 571

Query: 308 TTIFPSVKNS 279
           T I P  +NS
Sbjct: 572 TPIAPKNRNS 581


>AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin
           protein 73 protein.
          Length = 577

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 177 SDPMYEVMIGGWGNAKSVIRKNRTK 251
           S+P YEV++GG   A  V+ +N+ K
Sbjct: 334 SNPHYEVVLGGKKTANFVVEENKIK 358


>Z68134-3|CAA92225.1|   97|Caenorhabditis elegans Hypothetical
           protein T27A8.4 protein.
          Length = 97

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -3

Query: 391 SGSDQDMNGIASPSRPAEIMPLSQRTQKPRYSPPLRIPGLSIST 260
           SG +QD+    + S   EI  +  ++    YSPP   P   + T
Sbjct: 32  SGENQDLGREENGSEEDEIQQVETQSDDGNYSPPSGTPETEVET 75


>U00036-9|AAK29852.1|  377|Caenorhabditis elegans Hypothetical
           protein R151.1 protein.
          Length = 377

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +3

Query: 252 PDKVEIESPGILNGGEYRGFWVRWDSGIISAGREGEAIPF--ISWSDPEPFPVYY 410
           P  VEIE+  I++GG+     + W +      REG  I +  ++ +  + FP Y+
Sbjct: 3   PTNVEIETKVIMDGGKILETTINWKADEKDTRREGFYIRYTAVNSTCQKHFPGYF 57


>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
           protein Y81G3A.3 protein.
          Length = 1696

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +1

Query: 382 LIPNLSQFTTSESAQAGVPQAPGKSKMERNSILRTG*SI 498
           LIP + + +  +S+   VP  PGK K+ +   L+TG S+
Sbjct: 561 LIPIVEETSDDDSSLGAVP-IPGKEKIGKKGKLKTGKSL 598


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,059,933
Number of Sequences: 27780
Number of extensions: 272898
Number of successful extensions: 801
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)