Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30562
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064957-1|AAH64957.1|  226|Homo sapiens SPCS2 protein protein.       130   4e-30
BC106066-1|AAI06067.1|  226|Homo sapiens SPCS2 protein protein.       128   1e-29
D14658-1|BAA03492.1|  123|Homo sapiens KIAA0102 protein.               79   7e-15
CR542243-1|CAG47039.1|  123|Homo sapiens KIAA0102 protein.             79   7e-15
CR542233-1|CAG47029.1|  123|Homo sapiens KIAA0102 protein.             79   7e-15
BC082231-1|AAH82231.2|  123|Homo sapiens signal peptidase comple...    79   7e-15
BC070276-1|AAH70276.2|  123|Homo sapiens signal peptidase comple...    79   7e-15
BC008063-1|AAH08063.3|  123|Homo sapiens signal peptidase comple...    79   7e-15

>BC064957-1|AAH64957.1|  226|Homo sapiens SPCS2 protein protein.
          Length = 226

 Score =  130 bits (313), Expect = 4e-30
 Identities = 62/139 (44%), Positives = 92/139 (66%), Gaps = 3/139 (2%)
 Frame = +3

Query: 96  KINKWDGAAAKNAVDDAIREVMTGDLKCKESFALIDGRLFXXXXXXXXXXXXXXWDYLYP 275
           KI+KWDG+A KN++DD++++V+    K  E+F LIDGRL               WDY++P
Sbjct: 47  KIDKWDGSAVKNSLDDSVKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHP 106

Query: 276 FPQSRLVLIICVSSYFILMGILTLYTTFKEKGIFVVAXEK--VG-NNTRVWEASSYVKKH 446
           FP+S+ VL +CV SYF++MGILT+YT++KEK IF+VA  K   G +   +W+ SS +K+ 
Sbjct: 107 FPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRF 166

Query: 447 DDKYNLVIVMRDTNGNTRE 503
           DDKY L +     +G T++
Sbjct: 167 DDKYTLKLTF--ISGRTKQ 183


>BC106066-1|AAI06067.1|  226|Homo sapiens SPCS2 protein protein.
          Length = 226

 Score =  128 bits (309), Expect = 1e-29
 Identities = 62/139 (44%), Positives = 91/139 (65%), Gaps = 3/139 (2%)
 Frame = +3

Query: 96  KINKWDGAAAKNAVDDAIREVMTGDLKCKESFALIDGRLFXXXXXXXXXXXXXXWDYLYP 275
           KI+KWDG+A KN++DD+ ++V+    K  E+F LIDGRL               WDY++P
Sbjct: 47  KIDKWDGSAVKNSLDDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHP 106

Query: 276 FPQSRLVLIICVSSYFILMGILTLYTTFKEKGIFVVAXEK--VG-NNTRVWEASSYVKKH 446
           FP+S+ VL +CV SYF++MGILT+YT++KEK IF+VA  K   G +   +W+ SS +K+ 
Sbjct: 107 FPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRF 166

Query: 447 DDKYNLVIVMRDTNGNTRE 503
           DDKY L +     +G T++
Sbjct: 167 DDKYTLKLTF--ISGRTKQ 183


>D14658-1|BAA03492.1|  123|Homo sapiens KIAA0102 protein.
          Length = 123

 Score = 79.4 bits (187), Expect = 7e-15
 Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
 Frame = +3

Query: 267 LYPFPQSRLVLIICVSSYFILMGILTLYTTFKEKGIFVVAXEK--VG-NNTRVWEASSYV 437
           ++PFP+S+ VL +CV SYF++MGILT+YT++KEK IF+VA  K   G +   +W+ SS +
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSL 60

Query: 438 KKHDDKYNLVIVMRDTNGNTRE 503
           K+ DDKY L +     +G T++
Sbjct: 61  KRFDDKYTLKLTF--ISGRTKQ 80


>CR542243-1|CAG47039.1|  123|Homo sapiens KIAA0102 protein.
          Length = 123

 Score = 79.4 bits (187), Expect = 7e-15
 Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
 Frame = +3

Query: 267 LYPFPQSRLVLIICVSSYFILMGILTLYTTFKEKGIFVVAXEK--VG-NNTRVWEASSYV 437
           ++PFP+S+ VL +CV SYF++MGILT+YT++KEK IF+VA  K   G +   +W+ SS +
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSL 60

Query: 438 KKHDDKYNLVIVMRDTNGNTRE 503
           K+ DDKY L +     +G T++
Sbjct: 61  KRFDDKYTLKLTF--ISGRTKQ 80


>CR542233-1|CAG47029.1|  123|Homo sapiens KIAA0102 protein.
          Length = 123

 Score = 79.4 bits (187), Expect = 7e-15
 Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
 Frame = +3

Query: 267 LYPFPQSRLVLIICVSSYFILMGILTLYTTFKEKGIFVVAXEK--VG-NNTRVWEASSYV 437
           ++PFP+S+ VL +CV SYF++MGILT+YT++KEK IF+VA  K   G +   +W+ SS +
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSL 60

Query: 438 KKHDDKYNLVIVMRDTNGNTRE 503
           K+ DDKY L +     +G T++
Sbjct: 61  KRFDDKYTLKLTF--ISGRTKQ 80


>BC082231-1|AAH82231.2|  123|Homo sapiens signal peptidase complex
           subunit 2 homolog (S. cerevisiae) protein.
          Length = 123

 Score = 79.4 bits (187), Expect = 7e-15
 Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
 Frame = +3

Query: 267 LYPFPQSRLVLIICVSSYFILMGILTLYTTFKEKGIFVVAXEK--VG-NNTRVWEASSYV 437
           ++PFP+S+ VL +CV SYF++MGILT+YT++KEK IF+VA  K   G +   +W+ SS +
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSL 60

Query: 438 KKHDDKYNLVIVMRDTNGNTRE 503
           K+ DDKY L +     +G T++
Sbjct: 61  KRFDDKYTLKLTF--ISGRTKQ 80


>BC070276-1|AAH70276.2|  123|Homo sapiens signal peptidase complex
           subunit 2 homolog (S. cerevisiae) protein.
          Length = 123

 Score = 79.4 bits (187), Expect = 7e-15
 Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
 Frame = +3

Query: 267 LYPFPQSRLVLIICVSSYFILMGILTLYTTFKEKGIFVVAXEK--VG-NNTRVWEASSYV 437
           ++PFP+S+ VL +CV SYF++MGILT+YT++KEK IF+VA  K   G +   +W+ SS +
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSL 60

Query: 438 KKHDDKYNLVIVMRDTNGNTRE 503
           K+ DDKY L +     +G T++
Sbjct: 61  KRFDDKYTLKLTF--ISGRTKQ 80


>BC008063-1|AAH08063.3|  123|Homo sapiens signal peptidase complex
           subunit 2 homolog (S. cerevisiae) protein.
          Length = 123

 Score = 79.4 bits (187), Expect = 7e-15
 Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
 Frame = +3

Query: 267 LYPFPQSRLVLIICVSSYFILMGILTLYTTFKEKGIFVVAXEK--VG-NNTRVWEASSYV 437
           ++PFP+S+ VL +CV SYF++MGILT+YT++KEK IF+VA  K   G +   +W+ SS +
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSL 60

Query: 438 KKHDDKYNLVIVMRDTNGNTRE 503
           K+ DDKY L +     +G T++
Sbjct: 61  KRFDDKYTLKLTF--ISGRTKQ 80


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,697,671
Number of Sequences: 237096
Number of extensions: 1431628
Number of successful extensions: 2557
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2547
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)