Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30561
(509 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 338 2e-93
SB_56| Best HMM Match : Actin (HMM E-Value=0) 337 3e-93
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 337 3e-93
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 336 5e-93
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 256 8e-69
SB_54| Best HMM Match : Actin (HMM E-Value=0) 238 2e-63
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 233 6e-62
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 206 8e-54
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 195 2e-50
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 171 2e-43
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 97 6e-21
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 90 1e-18
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 6e-13
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 38 0.006
SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5) 32 0.24
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 32 0.24
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.73
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 31 0.73
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.96
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 2.9
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6) 28 5.1
SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7) 27 6.8
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_22886| Best HMM Match : LRR_1 (HMM E-Value=2e-06) 27 9.0
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 27 9.0
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 27 9.0
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 338 bits (830), Expect = 2e-93
Identities = 160/165 (96%), Positives = 164/165 (99%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 144
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVI
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVI 249
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 337 bits (829), Expect = 3e-93
Identities = 160/165 (96%), Positives = 164/165 (99%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY
Sbjct: 84 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 143
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 144 ASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 203
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVI
Sbjct: 204 AEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVI 248
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 337 bits (828), Expect = 3e-93
Identities = 161/165 (97%), Positives = 164/165 (99%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY
Sbjct: 84 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 143
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 144 ASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 203
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKL YVALDFEQEMATAAAS+SLEKSYELPDGQVI
Sbjct: 204 AEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVI 248
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 336 bits (827), Expect = 5e-93
Identities = 159/165 (96%), Positives = 164/165 (99%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 144
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVI
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVI 249
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 256 bits (627), Expect = 8e-69
Identities = 123/134 (91%), Positives = 130/134 (97%)
Frame = +1
Query: 106 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 285
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 286 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST 465
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA+S+
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSS 197
Query: 466 SLEKSYELPDGQVI 507
SLEKSYELPDGQVI
Sbjct: 198 SLEKSYELPDGQVI 211
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 238 bits (583), Expect = 2e-63
Identities = 108/165 (65%), Positives = 133/165 (80%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AE++I+RD+KE LCY A+D+E+E+ A S E Y LPDGQ I
Sbjct: 2249 AEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSI 2293
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 233 bits (570), Expect = 6e-62
Identities = 124/165 (75%), Positives = 130/165 (78%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 144
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIV+DS G + H + I ERGYSFTTT
Sbjct: 145 ASGRTTGIVMDS------------GDGVSHTV---------------PIYEERGYSFTTT 177
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCYVALDFEQEM TAA+S+S+EKSYELPDGQVI
Sbjct: 178 AEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVI 222
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 206 bits (503), Expect = 8e-54
Identities = 97/106 (91%), Positives = 102/106 (96%)
Frame = +1
Query: 127 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 306
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 307 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 444
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 195 bits (476), Expect = 2e-50
Identities = 89/165 (53%), Positives = 119/165 (72%), Gaps = 1/165 (0%)
Frame = +1
Query: 16 IWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
+W +TF +++ + P VLLTE PLNP NREKM ++MFE + +Y+AIQAVL+LY
Sbjct: 88 VWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLY 147
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
A G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F T
Sbjct: 148 AQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHT 207
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
A+ E VR +KEKLCYV + EQE A +T L + Y LPDG+V+
Sbjct: 208 ADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVV 252
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 171 bits (417), Expect = 2e-43
Identities = 74/116 (63%), Positives = 101/116 (87%)
Frame = +1
Query: 61 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 240
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 241 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 408
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 97.5 bits (232), Expect = 6e-21
Identities = 49/113 (43%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Frame = +1
Query: 172 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE- 348
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 349 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
RG++FT+++ +IV DIKEK+CY++ D +E+ + L K Y LPDGQ+I
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMI 879
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/112 (36%), Positives = 70/112 (62%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KI + + ++ HP+L++EA N + REK+T++MFE +N PA ++ +VL+ +
Sbjct: 17 KILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNVPAFFLCKNSVLTAF 76
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 348
A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T ++ E
Sbjct: 77 ANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 70.9 bits (166), Expect = 6e-13
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Frame = +1
Query: 166 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 321
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 322 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 447
++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 100 FFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 16 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 195
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 196 SGRTTGIV 219
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 37.5 bits (83), Expect = 0.006
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Frame = +1
Query: 112 EKMTQIMFETFNSPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYA 273
+ M +I+FE +N A+ A LS Y S +V+D+G +H VP++ G
Sbjct: 319 DAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKV 378
Query: 274 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 453
+ A+ R + +L E +F ++ +KE CYV+ F ++M A
Sbjct: 379 IKKAVRR-----------QLHVLDE---TF-------VINQVKEDTCYVSSQFYKDMEIA 417
Query: 454 ---AASTSLEKSYELPD 495
++ + Y LPD
Sbjct: 418 RQRGKENTIVREYVLPD 434
>SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5)
Length = 257
Score = 32.3 bits (70), Expect = 0.24
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -3
Query: 384 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGV----GDTISGVEH 217
F +SG + D H++ + +TS V+ + G + D + T S E
Sbjct: 134 FGISGTANTEEQIDVDKHQITNKASTSSVEKANTAGTTGGTQDQHATQGNKASTCSFEEA 193
Query: 216 DTGGTTGGVQ 187
+T GTTGG Q
Sbjct: 194 NTAGTTGGTQ 203
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 32.3 bits (70), Expect = 0.24
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 208 TGIVLDSGDGVSHTVPI 258
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 0.73
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 103 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 219
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 30.7 bits (66), Expect = 0.73
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1
Query: 454 AASTSLEKSYELPDGQVI 507
A S LEK+YELPDGQVI
Sbjct: 5 ANSPILEKTYELPDGQVI 22
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 0.96
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -3
Query: 348 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVEHDTGG 205
L E + +V Q + GV S G+G G TISG D+GG
Sbjct: 1474 LQEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGG 1521
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -1
Query: 308 PAKSRRRMAWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNM 129
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 128 IWVIFSLLALGLR 90
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 291 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 193
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 106 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 255
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 91 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 219
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6)
Length = 188
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -1
Query: 257 MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELK-VSNMIWVIFSLLALGLRGAS 81
M + + PSP P+A+ + A Y +G LK S V + L+ G G
Sbjct: 1 MAELADLPSPRMDWSSTDLPQAFKKFRATCELYFSGPLKEKSEPDKVSYLLIWTGDEGIE 60
Query: 80 VSSTGCSSGATRSSL*KVW 24
+SST S L W
Sbjct: 61 LSSTWALSADDSKKLDTYW 79
>SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = -1
Query: 182 STAWMATYMAGELKVSNMIWV---IFSLLALGL 93
S AW+ + + EL+ S +WV IFS+L +G+
Sbjct: 163 SVAWLCSLLYLELEASLYVWVPSLIFSILIIGV 195
>SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 590
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +3
Query: 234 WCLPHRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS 392
WC H+ R PR P G WS PH++ + L H H G S
Sbjct: 352 WCAKHQ---ERSHQQPRQPDQGQSWS-----PHKE-YNVTFLHHRHHPTGQSS 395
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 27.1 bits (57), Expect = 9.0
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +1
Query: 7 WXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLS 186
+ K+ T YN L V +PV + + + N + TQ+M T +P Y + V +
Sbjct: 79 YAKLMVFTRYNPLMVFTRYNPVRYAQLLVFTRYNPVRYTQLMVFTRYNPVRYTQLM-VFT 137
Query: 187 LYASGRTTGIVL 222
Y R T +++
Sbjct: 138 RYNHVRYTQLMV 149
>SB_22886| Best HMM Match : LRR_1 (HMM E-Value=2e-06)
Length = 583
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/70 (20%), Positives = 33/70 (47%)
Frame = +1
Query: 280 HAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAA 459
H I LD+ G ++ + + GY T++ + + K ++ Y AL + + + +
Sbjct: 102 HNITELDICGTEIPFSELFASSLEGYECTSSLRKLNISHAKGEIDYAALGYFKNLTSLDV 161
Query: 460 STSLEKSYEL 489
S ++ ++L
Sbjct: 162 SHNMFSDFDL 171
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 27.1 bits (57), Expect = 9.0
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3
Query: 396 VTNDFPLSGGGE-RVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVE 220
V++D + E RV+ G + +G+V+ +DGVG+ D GVGD +G
Sbjct: 88 VSDDGGVGDNAEGRVSDDGGVGDDAIGRVSDDGGVGDDGVGR---VSDNGGVGDDANGRV 144
Query: 219 HDTGG 205
D GG
Sbjct: 145 SDDGG 149
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 242 PTPYPSTKVTLCPTPSSVW 298
PTP+P+T V +P S+W
Sbjct: 1373 PTPFPTTPVPPTTSPPSIW 1391
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,782,485
Number of Sequences: 59808
Number of extensions: 250953
Number of successful extensions: 919
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1123894172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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