Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30561
(509 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 339 7e-94
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 339 7e-94
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 338 1e-93
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 338 1e-93
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 338 1e-93
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 338 1e-93
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 338 1e-93
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 338 1e-93
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 338 1e-93
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 338 1e-93
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 321 2e-88
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 202 2e-52
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 199 8e-52
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 133 8e-32
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 106 8e-24
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 62 2e-10
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 52 3e-07
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.28
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.37
U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical pr... 29 2.0
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 29 2.6
AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein. 27 7.9
AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein. 27 7.9
AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 27 7.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 339 bits (833), Expect = 7e-94
Identities = 161/165 (97%), Positives = 165/165 (100%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVI
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 339 bits (833), Expect = 7e-94
Identities = 161/165 (97%), Positives = 165/165 (100%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVI
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 338 bits (832), Expect = 1e-93
Identities = 160/165 (96%), Positives = 165/165 (100%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVI
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 338 bits (832), Expect = 1e-93
Identities = 160/165 (96%), Positives = 165/165 (100%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVI
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 338 bits (832), Expect = 1e-93
Identities = 160/165 (96%), Positives = 165/165 (100%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVI
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 338 bits (832), Expect = 1e-93
Identities = 160/165 (96%), Positives = 165/165 (100%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVI
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 338 bits (832), Expect = 1e-93
Identities = 160/165 (96%), Positives = 165/165 (100%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVI
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 338 bits (832), Expect = 1e-93
Identities = 160/165 (96%), Positives = 165/165 (100%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 41 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 100
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 101 ASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 160
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVI
Sbjct: 161 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 205
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 338 bits (832), Expect = 1e-93
Identities = 160/165 (96%), Positives = 165/165 (100%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 71 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 130
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 131 ASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 190
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVI
Sbjct: 191 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 235
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 338 bits (832), Expect = 1e-93
Identities = 160/165 (96%), Positives = 165/165 (100%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVI
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 321 bits (789), Expect = 2e-88
Identities = 150/165 (90%), Positives = 160/165 (96%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFETFN+PAMYV IQAVLSLY
Sbjct: 84 KIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLY 143
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
ASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FTTT
Sbjct: 144 ASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTT 203
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
AEREIVRDIKEKLCYVA DFE E+A AA+S+SLEKSYELPDGQVI
Sbjct: 204 AEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVI 248
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 202 bits (492), Expect = 2e-52
Identities = 94/165 (56%), Positives = 123/165 (74%), Gaps = 1/165 (0%)
Frame = +1
Query: 16 IWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
+W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE + ++YVA+QAVL+LY
Sbjct: 88 VWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLY 147
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 372
A G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F +
Sbjct: 148 AQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHS 207
Query: 373 AEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVI 507
A+ E VR +KEKLCY+A D EQE A +T L + Y LPDG+VI
Sbjct: 208 ADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVI 252
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 199 bits (486), Expect = 8e-52
Identities = 94/162 (58%), Positives = 122/162 (75%), Gaps = 1/162 (0%)
Frame = +1
Query: 13 KIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSL 189
KIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FETFN PA+Y+ +QAVLSL
Sbjct: 87 KIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSL 146
Query: 190 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 369
YA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F
Sbjct: 147 YATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHR 206
Query: 370 TAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPD 495
+ E EIVR++KE CY+ALD T + S++ SY LPD
Sbjct: 207 SNEFEIVREMKENACYLALD-----PTKVENNSVKSSYALPD 243
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 133 bits (321), Expect = 8e-32
Identities = 63/151 (41%), Positives = 92/151 (60%), Gaps = 8/151 (5%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
+ W + LR PE+H LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L
Sbjct: 98 RYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALT 157
Query: 193 ASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 348
AS + TG+V+DSGDGV+H +P+ +GY + I + +AGRD+T ++ +L +
Sbjct: 158 ASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRD 217
Query: 349 RGYSFTTTAEREIVRDIKEKLCYVALDFEQE 441
R ++ E+ + IKEK CYV D +E
Sbjct: 218 REHTIPAEQSYEVAKMIKEKFCYVCPDVMKE 248
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 106 bits (255), Expect = 8e-24
Identities = 48/113 (42%), Positives = 76/113 (67%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 192
KI H++ N L P EHPVL +E+ N +A REK+T+IMFE F PA Y++ VLS +
Sbjct: 107 KIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCF 166
Query: 193 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 351
A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 167 AQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 62.1 bits (144), Expect = 2e-10
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Frame = +1
Query: 40 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 219
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 220 LDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIV 390
+D G+ V + VP+ +GY + AI + + + D L L+ Y+F + E+ I+
Sbjct: 326 VDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLIL 384
Query: 391 RDIKEKLCYVALDFEQE 441
R E+ YV D+++E
Sbjct: 385 RFALEQTTYVPEDYQKE 401
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 51.6 bits (118), Expect = 3e-07
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 7/171 (4%)
Frame = +1
Query: 4 TWXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 183
T +IW TF + V + LT+ A + ++I+F+ F ++ + L
Sbjct: 73 TQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSASTL 131
Query: 184 SLYASGRTTG----IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 351
S + +V+DSG + G + +++R+D+ G+ LT+ L ++ R
Sbjct: 132 VAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR 191
Query: 352 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA---ASTSLEKSYELPD 495
+ E ++ + KE LC+V+ +F++ M A + K Y +PD
Sbjct: 192 --QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPD 240
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 51.6 bits (118), Expect = 3e-07
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 7/171 (4%)
Frame = +1
Query: 4 TWXKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 183
T +IW TF + V + LT+ A + ++I+F+ F ++ + L
Sbjct: 73 TQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSASTL 131
Query: 184 SLYASGRTTG----IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 351
S + +V+DSG + G + +++R+D+ G+ LT+ L ++ R
Sbjct: 132 VAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR 191
Query: 352 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA---ASTSLEKSYELPD 495
+ E ++ + KE LC+V+ +F++ M A + K Y +PD
Sbjct: 192 --QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPD 240
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 239 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 144
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 384 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 250
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical
protein F59A3.8 protein.
Length = 577
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +3
Query: 246 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS*HQGEALLCRP 425
++ +L++ S PR PP G + ++P+ DP G V+ + + + H E+L P
Sbjct: 72 NKPNLKKSPSNPRIPPGGSHPRKKPKVPNRDP--SGKHVNSDKKKPSAEAHDKESLSSPP 129
Query: 426 RLRAG 440
+ AG
Sbjct: 130 QTDAG 134
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 28.7 bits (61), Expect = 2.6
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = +1
Query: 13 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF-ETFNSPAMYVAIQA--VL 183
K W T + L + + + PL+ K+ K T I + ET + + AI A L
Sbjct: 211 KAWKQTSHL-LCIGTSLEIIPMGSLPLDAKSKGIKTTTINYQETAHEKIVETAIHADVKL 269
Query: 184 SLYASGRTTGIVLDSGDGVSHTVPI 258
LY+ G+ +D GD + VPI
Sbjct: 270 ILYSLCNALGVNVDLGDDLPDEVPI 294
>AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein.
Length = 394
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 348 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 247
+GED V+G V S T GVG S + D G
Sbjct: 75 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 108
>AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein.
Length = 459
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 348 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 247
+GED V+G V S T GVG S + D G
Sbjct: 172 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 205
>AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein.
Length = 583
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 348 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 247
+GED V+G V S T GVG S + D G
Sbjct: 296 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,146,066
Number of Sequences: 27780
Number of extensions: 174442
Number of successful extensions: 637
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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